| MirGeneDB ID | Laf-Mir-130-P3b |
|---|---|
| Family name | MIR-130 (all species) |
| Seed | AGUGCAA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-130-P1c Laf-Mir-130-P2a Laf-Mir-130-P2b Laf-Mir-130-P4a |
| Orthologues | Bta-Mir-130-P3b Cfa-Mir-130-P3b Cja-Mir-130-P3b Cmi-Mir-130-P3b Cpo-Mir-130-P3b Dno-Mir-130-P3b Dre-Mir-130-P3b1 Eca-Mir-130-P3b Gmo-Mir-130-P3b1 Hsa-Mir-130-P3b Lch-Mir-130-P3b Mdo-Mir-130-P3b Mml-Mir-130-P3b Neu-Mir-130-P3b Oan-Mir-130-P3b Pab-Mir-130-P3b Sha-Mir-130-P3b Sto-Mir-130-P3b |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010058.1: 9743009-9743072 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAAAUUUCCUGUUUAUUACCAGAUCCUAGAACCCUAUCGAUAUUGUCUCUGCUGUAUAAAUAGUUCUGAGUAGUGCAAUAUUGCUUAUAGGGUUUUAGUGUUUGGGAAGAACGAUGGGCAGACUGet precursor sequence |
| Structure | 10 20 30 40 50 60 AAAAUUUCCUGUUUAUUA- UC ---| CU GUAUAAA CCAGA CUAGAACCCUAU CGAUAUUGU CUGCU \ GGUUU GAUUUUGGGAUA GUUAUAACG GAUGA U UCAGACGGGUAGCAAGAAG GU UUC^ U- GUCUUGA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Laf-Mir-130-P3b_5p* |
| mirBase accession | None |
| Sequence |
0- ACCCUAUCGAUAUUGUCUCUGCU -23
Get sequence
|
| Mature sequence | Laf-Mir-130-P3b_3p |
| mirBase accession | None |
| Sequence |
40- UAGUGCAAUAUUGCUUAUAGGGUU -64
Get sequence
|
