MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Laf-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980301: 26088336-26088395 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GCAUCACGAAUGAACUUUGGUCCCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCUAGCAAAUGCCCUAGGAGCUCAGUUCUGGUGCCCGGCAGGCCGUGCUACACCGGUGGUGC
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Structure
        10        20          30        40        50        60
GCAUCACGAAUGAACUUU    --| U   U  G        A    A    CU  GAGCU 
                  GGUC  CC GGC CU AGAACUGA UUCC UAGG  GU     C
                  CCGG  GG CCG GG UCUUGACU GAGG AUCC  UA     U
CGUGGUGGCCACAUCGUG    AC^ C   U  -        C    -    CG  AACGA 
.       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ete-Mir-146-P1_5p
mirBase accessionNone
Sequence 
0- UGAGAACUGAAUUCCAUAGGCUGU -24
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Star sequence

Ete-Mir-146-P1_3p*
mirBase accessionNone
Sequence 
38- GCCCUAGGAGCUCAGUUCUGGU -60
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