MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Laf-Mir-146-P1  Lch-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG5: 36680703-36680765 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GUUCUCCGGAGACAAAGGAGCUCUUGGCUGUGAGAACUGAAUUCCAUAGAUGGUGACCCACUGAGUAGCCCAUCUAUGGCUUCAGUUCUUGUAGUCUGAGGCUCAAAGUCGGCGGGCUGGGAC
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Structure
        10          20         30        40        50        60 
GUUCUCCGGAGACAAAG--|   U  UG -   UG         UU          UGACCCA 
                   GAGC CU  G CUG  AGAACUGAA  CCAUAGAUGG       C
                   CUCG GA  C GAU  UCUUGACUU  GGUAUCUACC       U
CAGGGUCGGGCGGCUGAAA^   -  GU U   GU         C-          CGAUGAG 
 120       110        100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Mature sequence

Loc-Mir-146-P1_5p
mirBase accessionNone
Sequence 
0- UGAGAACUGAAUUCCAUAGAUGG -23
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Star sequence

Loc-Mir-146-P1_3p*
mirBase accessionNone
Sequence 
41- AUCUAUGGCUUCAGUUCUUGUA -63
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