MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-146b
Paralogues Gga-Mir-146-P2  Gga-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Ete-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Laf-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 6: 24096341-24096401 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAAGCCAGCGAGGACUGGCUGCUUGGCUUUGAGAACUGAAUUCCAUAGGCGUUAAAGCAUCCAAAAAUGCCCUAUGGAUUCAGUUCUGCAGUUGGGCAGCAAAUAAACCUCCAGCCUUCA
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Structure
        10          20        30        40        50         60
GGAAGCCAGCGAGGACUG--|     UG   UUG          U       -    AAAGC 
                    GCUGCU  GCU   AGAACUGAAU CCAUAGG CGUU     A
                    CGACGG  UGA   UCUUGACUUA GGUAUCC GUAA     U
ACUUCCGACCUCCAAAUAAA^     GU   CG-          -       C    AAACC 
 .       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-146-P1_5p
mirBase accessionMIMAT0003351
Sequence 
0- UGAGAACUGAAUUCCAUAGGCGUU -24
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Proposed targets TargetScanVert: gga-miR-146b-5p
miRDB: MIMAT0003351
Star sequence

Gga-Mir-146-P1_3p*
mirBase accessionMIMAT0003724
Sequence 
38- UGCCCUAUGGAUUCAGUUCUGCA -61
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Proposed targets TargetScanVert: gga-miR-146b-3p
miRDB: MIMAT0003724