| MirGeneDB ID | Laf-Mir-146-P1 |
|---|---|
| Family name | MIR-146 (all species) |
| Seed | GAGAACU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-146-P4 |
| Orthologues | Aca-Mir-146-P1 Ami-Mir-146-P1 Bta-Mir-146-P1 Cfa-Mir-146-P1 Cja-Mir-146-P1 Cli-Mir-146-P1 Cmi-Mir-146-P1 Cpi-Mir-146-P1 Cpo-Mir-146-P1 Dno-Mir-146-P1 Dre-Mir-146-P1 Ebu-Mir-146 Eca-Mir-146-P1 Ete-Mir-146-P1 Gga-Mir-146-P1 Gja-Mir-146-P1 Gmo-Mir-146-P1 Hsa-Mir-146-P1 Lch-Mir-146-P1 Loc-Mir-146-P1 Mal-Mir-146-P1 Mdo-Mir-146-P1 Mml-Mir-146-P1 Mmr-Mir-146-P1 Mmu-Mir-146-P1 Mun-Mir-146-P1 Oan-Mir-146-P1 Ocu-Mir-146-P1 Pab-Mir-146-P1 Pbv-Mir-146-P1 Pma-Mir-146 Rno-Mir-146-P1 Sha-Mir-146-P1 Spt-Mir-146-P1 Tgu-Mir-146-P1 Tni-Mir-146-P1 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010037.1: 15910209-15910268 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGUCACAAAAGAAGUCUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAACUCUAGCAGAUGCCCUAGGAACUCAGUUCUGGUGCCCGGCUGUGCUGCGCCGCCAUCAAUGCUGet precursor sequence |
| Structure | 10 20 30 40 50 AGUCACAAAAGAAGUCUG - -| U U G A AUA UGUGAACU GC CA CC GGC CU AGAACUGA UUCC GGC \ CG GU GG CCG GG UCUUGACU AAGG CCG C UCGUAACUACCGCCGCGU U C^ C U - C AUC UAGACGAU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-146-P1_5p |
| mirBase accession | None |
| Sequence |
0- UGAGAACUGAAUUCCAUAGGCUGU -24
Get sequence
|
| Star sequence | Laf-Mir-146-P1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- GCCCUAGGAACUCAGUUCUGGU -60
Get sequence
|
