MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010037.1: 15910209-15910268 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUCACAAAAGAAGUCUGGCCACCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAACUCUAGCAGAUGCCCUAGGAACUCAGUUCUGGUGCCCGGCUGUGCUGCGCCGCCAUCAAUGCU
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Structure
        10        20          30        40        50          
AGUCACAAAAGAAGUCUG  -  -| U   U  G        A    AUA   UGUGAACU 
                  GC CA CC GGC CU AGAACUGA UUCC   GGC        \
                  CG GU GG CCG GG UCUUGACU AAGG   CCG        C
UCGUAACUACCGCCGCGU  U  C^ C   U  -        C    AUC   UAGACGAU 
.       110       100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-146-P1_5p
mirBase accessionNone
Sequence 
0- UGAGAACUGAAUUCCAUAGGCUGU -24
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Star sequence

Laf-Mir-146-P1_3p* (predicted)
mirBase accessionNone
Sequence 
38- GCCCUAGGAACUCAGUUCUGGU -60
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