MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Laf-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL834465.1: 4322425-4322484 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGCUUAUGCCCACACCCUGGCAUCUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGCUCAUGCAGAUGCCCUAGGAAGUCAGUUCUGGAGCCCGGUGGCCUCAAUCUGGUGGAGUCCAG
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Structure
        10         20         30        40        50          
CGCUUAUGCCCACACCCU-  -|   U      G        A    AUA   UGUGAGCU 
                   GG CAUC GGCUCU AGAACUGA UUCC   GGC        \
                   CC GUGG CCGAGG UCUUGACU AAGG   CCG        C
GACCUGAGGUGGUCUAACU  G^   C      -        G    AUC   UAGACGUA 
.       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-146-P1_5p
mirBase accessionNone
Sequence 
0- UGAGAACUGAAUUCCAUAGGCUGU -24
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Star sequence

Sha-Mir-146-P1_3p*
mirBase accessionNone
Sequence 
38- GCCCUAGGAAGUCAGUUCUGGA -60
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