MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Laf-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884740.1: 518317-518378 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGGACCAAAUUUCAAUAAGUGCUCUACUAUGAGAACUGAAUUCCAUAGAUGGUGGCUACUUCAGGUGUCAUCUAUGGGCUCAGUUCUUUUGGCAUGGUACUAAUUUAUCAGUUUGUCAGAC
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Structure
        10          20        30        40        50        60 
GAGGACCAAAUUUCAAUA--|     CUA   U         AU           UGGCUAC 
                    AGUGCU   CUA GAGAACUGA  UCCAUAGAUGG       \
                    UCAUGG   GGU UUCUUGACU  GGGUAUCUACU       U
CAGACUGUUUGACUAUUUAA^     UAC   U         C-           GUGGACU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-146-P1_5p
mirBase accessionNone
Sequence 
0- UGAGAACUGAAUUCCAUAGAUGG -23
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Star sequence

Mal-Mir-146-P1_3p*
mirBase accessionNone
Sequence 
40- AUCUAUGGGCUCAGUUCUUUUG -62
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