MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-146-P2  Cmi-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Laf-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636206.1: 199369-199432 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGGCCUCAGUGUCAGCCGCGGCUCAGCUCUGAGAACUGUAUUCCAUAGACUGUCACAGCAGCCAAUAUCCAGUCUUUGGAUUCAGUUCCCAAAGCUUUGUCACCACUCAGCAACACCUCAAAG
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Structure
        10        20          30        40        50        60  
GAGGCCUCAGUGUCAGCCGC--|  UC    C  A      UAU    U      UCACAGCA 
                      GGC  AGCU UG GAACUG   UCCA AGACUG        \
                      CUG  UCGA AC CUUGAC   AGGU UCUGAC        G
GAAACUCCACAACGACUCACCA^  UU    A  C      UU-    U      CUAUAACC 
  120       110       100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-146-P1_5p
mirBase accessionNone
Sequence 
0- UGAGAACUGUAUUCCAUAGACUGU -24
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Star sequence

Cmi-Mir-146-P1_3p*
mirBase accessionNone
Sequence 
41- AGUCUUUGGAUUCAGUUCCCAAA -64
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