MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-146b
Paralogues Oan-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Laf-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Ocu-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tgu-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041743.1: 34965095-34965154 [-]
Precursor
(pre-Mir +30nt flank)
CCUCCCAGGCCCAAAUGCGGUGCUUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGUUGAUGAGGAUGCCCUAGGGAUUCAGUUCCACAGCCCAGCAACCCACAGCACUGGCCUCACAG
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Structure
        10         20         30        40        50          
CCUCCCAGGCCCAAAUGC-  -|   U    C  A            AUA   UGUGAGUU 
                   GG UGCU GGCU UG GAACUGAAUUCC   GGC        \
                   CC ACGA CCGA AC CUUGACUUAGGG   CCG        G
GACACUCCGGUCACGACAC  A^   C    C  -            AUC   UAGGAGUA 
.       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-146-P1_5p

mirBase accessionMIMAT0007007
Sequence
0- UGAGAACUGAAUUCCAUAGGCUGU -24
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Star sequence

Oan-Mir-146-P1_3p*

mirBase accessionMIMAT0007008
Sequence
38- GCCCUAGGGAUUCAGUUCCACA -60
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