Mir-146-P1

MirGeneDB ID

Oan-Mir-146-P1

Family name

MIR-146 (all species)

Seed

GAGAACU

Species

Platypus (Ornithorhynchus anatinus)

MiRBase ID

oan-mir-146b

Paralogues

Oan-Mir-146-P4

Orthologues

Aca-Mir-146-P1 Ami-Mir-146-P1 Bta-Mir-146-P1 Cfa-Mir-146-P1 Cli-Mir-146-P1 Cmi-Mir-146-P1 Cpi-Mir-146-P1 Cpo-Mir-146-P1 Dno-Mir-146-P1 Dre-Mir-146-P1 Ebu-Mir-146 Ete-Mir-146-P1 Gga-Mir-146-P1 Gja-Mir-146-P1 Gmo-Mir-146-P1 Hsa-Mir-146-P1 Lch-Mir-146-P1 Loc-Mir-146-P1 Mal-Mir-146-P1 Mdo-Mir-146-P1 Mml-Mir-146-P1 Mmu-Mir-146-P1 Mun-Mir-146-P1 Ocu-Mir-146-P1 Pbv-Mir-146-P1 Pma-Mir-146 Rno-Mir-146-P1 Sha-Mir-146-P1 Spt-Mir-146-P1 Tgu-Mir-146-P1 Tni-Mir-146-P1

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(mOrnAna1.p.v1_plustraces)

NC_041743.1: 34965095-34965154 [-]

Precursor
(pre-Mir +30nt flank)

CCUCCCAGGCCCAAAUGCGGUGCUUGGCUCUGAGAACUGAAUUCCAUAGGCUGUGAGUUGAUGAGGAUGCCCUAGGGAUUCAGUUCCACAGCCCAGCAACCCACAGCACUGGCCUCACAG

Get precursor sequence

Structure

        10         20         30        40        50          
CCUCCCAGGCCCAAAUGC-  -|   U    C  A            AUA   UGUGAGUU 
                   GG UGCU GGCU UG GAACUGAAUUCC   GGC        \
                   CC ACGA CCGA AC CUUGACUUAGGG   CCG        G
GACACUCCGGUCACGACAC  A^   C    C  -            AUC   UAGGAGUA 
.       110       100        90         80        70