MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-146-P4

Family name MIR-146 (all species)
Seed GAGAACU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-146a
Paralogues Oan-Mir-146-P1 
Orthologues Ami-Mir-146-P4  Bta-Mir-146-P4-v1  Bta-Mir-146-P4-v2  Cfa-Mir-146-P4  Cja-Mir-146-P4  Cli-Mir-146-P4  Cmi-Mir-146-P4  Cpi-Mir-146-P4  Cpo-Mir-146-P4  Dno-Mir-146-P4  Dre-Mir-146-P4-v1  Dre-Mir-146-P4-v2  Ebu-Mir-146  Eca-Mir-146-P4-v1  Eca-Mir-146-P4-v2  Gga-Mir-146-P4  Hsa-Mir-146-P4  Laf-Mir-146-P4  Lch-Mir-146-P4  Loc-Mir-146-P4  Mdo-Mir-146-P4  Mml-Mir-146-P4  Mmr-Mir-146-P4  Mmu-Mir-146-P4  Mun-Mir-146-P4  Neu-Mir-146-P4  Ocu-Mir-146-P4  Pab-Mir-146-P4  Pma-Mir-146  Rno-Mir-146-P4  Sha-Mir-146-P4  Spt-Mir-146-P4  Sto-Mir-146-P4  Tgu-Mir-146-P4  Xla-Mir-146-P4  Xtr-Mir-146-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041749.1: 27130039-27130101 [-]
Precursor
(pre-Mir +30nt flank)
UUCAACUUGGAGAUUCAGUACGCUCAGCUUUGAGAACUGAAUUCCACGGGUUGUGAUUGCAACUCUGACAGACCCGUGGGGCUCAGUUCUUGAGCUGGGGUACCUCUGUCCUCGCAGAAUCCA
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Structure
        10           20        30        40        50         60 
UUCAACUUGGAGAUUCA---|   G      U UG        A          -   GAUUGC 
                    GUAC CUCAGC U  AGAACUGA UUCCACGGGU UGU      \
                    CAUG GGGUCG A  UCUUGACU GGGGUGCCCA ACA      A
ACCUAAGACGCUCCUGUCUC^   -      - GU        C          G   GUCUCA 
 120       110       100          90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Oan-Mir-146-P4_5p
mirBase accessionMIMAT0007230
Sequence 
0- UGAGAACUGAAUUCCACGGGUUGU -24
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Star sequence

Oan-Mir-146-P4_3p*
mirBase accessionMIMAT0007231
Sequence 
40- GACCCGUGGGGCUCAGUUCUUGA -63
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