MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-146-P4

Family name MIR-146 (all species)
Seed GAGAACU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-146a
Paralogues Mdo-Mir-146-P1 
Orthologues Ami-Mir-146-P4  Bta-Mir-146-P4-v1  Bta-Mir-146-P4-v2  Cfa-Mir-146-P4  Cja-Mir-146-P4  Cli-Mir-146-P4  Cmi-Mir-146-P4  Cpi-Mir-146-P4  Cpo-Mir-146-P4  Dno-Mir-146-P4  Dre-Mir-146-P4-v1  Dre-Mir-146-P4-v2  Ebu-Mir-146  Eca-Mir-146-P4-v1  Eca-Mir-146-P4-v2  Gga-Mir-146-P4  Hsa-Mir-146-P4  Laf-Mir-146-P4  Lch-Mir-146-P4  Loc-Mir-146-P4  Mml-Mir-146-P4  Mmr-Mir-146-P4  Mmu-Mir-146-P4  Mun-Mir-146-P4  Neu-Mir-146-P4  Oan-Mir-146-P4  Ocu-Mir-146-P4  Pab-Mir-146-P4  Pma-Mir-146  Rno-Mir-146-P4  Sha-Mir-146-P4  Spt-Mir-146-P4  Sto-Mir-146-P4  Tgu-Mir-146-P4  Xla-Mir-146-P4  Xtr-Mir-146-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)		 1: 356034898-356034954 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGAAUCUAGAGAACUUGUAUCUUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUCUUUGUAUCAGACCUAUGAAACUCAGUUCUUCAGCUGGAAUAUCUCUGUCAUCACAGACAAAG
Get precursor sequence
Structure
        10           20        30        40        50        
CAGAAUCUAGAGAACUU---|   C       UU         A  C        GUCUU 
                    GUAU UUCAGCU  GAGAACUGA UU CAUGGGUU     U
                    UAUA AGGUCGA  UUCUUGACU AA GUAUCCAG     G
GAAACAGACACUACUGUCUC^   -       C-         C  A        ACUAU 
     110       100         90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-146-P4_5p
mirBase accessionMIMAT0012746
Sequence 
0- UGAGAACUGAAUUCCAUGGGUUG -23
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Proposed targets TargetScanVert: mdo-miR-146a-5p
Star sequence

Mdo-Mir-146-P4_3p*
mirBase accessionMIMAT0026938
Sequence 
35- ACCUAUGAAACUCAGUUCUUCA -57
Get sequence
Proposed targets TargetScanVert: mdo-miR-146a-3p