MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-146-P4

Family name MIR-146 (all species)
Seed GAGAACU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-146-P1 
Orthologues Ami-Mir-146-P4  Bta-Mir-146-P4-v1  Bta-Mir-146-P4-v2  Cfa-Mir-146-P4  Cja-Mir-146-P4  Cli-Mir-146-P4  Cmi-Mir-146-P4  Cpi-Mir-146-P4  Cpo-Mir-146-P4  Dno-Mir-146-P4  Dre-Mir-146-P4-v1  Dre-Mir-146-P4-v2  Ebu-Mir-146  Eca-Mir-146-P4-v1  Eca-Mir-146-P4-v2  Gga-Mir-146-P4  Hsa-Mir-146-P4  Laf-Mir-146-P4  Lch-Mir-146-P4  Loc-Mir-146-P4  Mdo-Mir-146-P4  Mml-Mir-146-P4  Mmr-Mir-146-P4  Mmu-Mir-146-P4  Mun-Mir-146-P4  Neu-Mir-146-P4  Oan-Mir-146-P4  Ocu-Mir-146-P4  Pma-Mir-146  Rno-Mir-146-P4  Sha-Mir-146-P4  Spt-Mir-146-P4  Sto-Mir-146-P4  Tgu-Mir-146-P4  Xla-Mir-146-P4  Xtr-Mir-146-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054683.2: 169264655-169264711 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUGAAAAGCCGAUGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCUGUGUCAGACCUGUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUGUCGUCGUGGGCUUGA
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Structure
        10           20        30        40        50        
CUCUGAAAAGCCGAUGU---|     U     UU            C        GUGUC 
                    GUAUCC CAGCU  GAGAACUGAAUU CAUGGGUU     U
                    UAUAGG GUCGA  UUCUUGACUUAA GUGUCCAG     G
AGUUCGGGUGCUGCUGUCUC^     -     C-            A        ACUGU 
     110       100         90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Br Li Li
Mature sequence

Pab-Mir-146-P4_5p
mirBase accessionNone
Sequence 
0- UGAGAACUGAAUUCCAUGGGUU -22
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Star sequence

Pab-Mir-146-P4_3p* (predicted)
mirBase accessionNone
Sequence 
36- CCUGUGAAAUUCAGUUCUUCA -57
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