MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-146-P1

Family name MIR-146 (all species)
Seed GAGAACU
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-146b
Paralogues Tgu-Mir-146-P2  Tgu-Mir-146-P4 
Orthologues Aca-Mir-146-P1  Ami-Mir-146-P1  Bta-Mir-146-P1  Cfa-Mir-146-P1  Cja-Mir-146-P1  Cli-Mir-146-P1  Cmi-Mir-146-P1  Cpi-Mir-146-P1  Cpo-Mir-146-P1  Dno-Mir-146-P1  Dre-Mir-146-P1  Ebu-Mir-146  Eca-Mir-146-P1  Ete-Mir-146-P1  Gga-Mir-146-P1  Gja-Mir-146-P1  Gmo-Mir-146-P1  Hsa-Mir-146-P1  Laf-Mir-146-P1  Lch-Mir-146-P1  Loc-Mir-146-P1  Mal-Mir-146-P1  Mdo-Mir-146-P1  Mml-Mir-146-P1  Mmr-Mir-146-P1  Mmu-Mir-146-P1  Mun-Mir-146-P1  Oan-Mir-146-P1  Ocu-Mir-146-P1  Pab-Mir-146-P1  Pbv-Mir-146-P1  Pma-Mir-146  Rno-Mir-146-P1  Sha-Mir-146-P1  Spt-Mir-146-P1  Tni-Mir-146-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(TaeGut1_add)		 6: 22361514-22361573 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAAGCUGACUUGCACUGGCUGCUUGGCUCUGAGAACUGAAUUCCAUAGGCGUUGAAGCCUCCAAAAUGCCCUAUGGAUUCAGUUCUGCAGCUGGGCAGCAACUGAGCCUCAAACCUUCA
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Structure
        10          20        30        40        50           
GGAAGCUGACUUGCACUG--|     UG   CUG          U       -    GAAGC 
                    GCUGCU  GCU   AGAACUGAAU CCAUAGG CGUU     \
                    CGACGG  CGA   UCUUGACUUA GGUAUCC GUAA     C
ACUUCCAAACUCCGAGUCAA^     GU   CG-          -       C    AACCU 
.       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-146-P1_5p
mirBase accessionMIMAT0014602
Sequence 
0- UGAGAACUGAAUUCCAUAGGCGUU -24
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Star sequence

Tgu-Mir-146-P1_3p*
mirBase accessionMIMAT0014652
Sequence 
37- UGCCCUAUGGAUUCAGUUCUGCA -60
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