MirGeneDB 2.1
MirGeneDB ID

Ete-Mir-15-P1c

Family name MIR-15 (all species)
Seed AGCAGCA
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-15-P1a  Ete-Mir-15-P1b  Ete-Mir-15-P1d  Ete-Mir-15-P2a  Ete-Mir-15-P2b  Ete-Mir-15-P2c  Ete-Mir-15-P2d 
Orthologues Aca-Mir-15-P1c  Ami-Mir-15-P1c  Bta-Mir-15-P1c  Cfa-Mir-15-P1c  Cin-Mir-15-P1  Cli-Mir-15-P1c  Cmi-Mir-15-P1c  Cpi-Mir-15-P1c  Cpo-Mir-15-P1c  Dno-Mir-15-P1c  Gga-Mir-15-P1c  Gja-Mir-15-P1c  Hsa-Mir-15-P1c  Lch-Mir-15-P1c  Loc-Mir-15-P1c  Loc-Mir-15-P1c-as  Mdo-Mir-15-P1c-v1  Mdo-Mir-15-P1c-v2  Mml-Mir-15-P1c  Mmu-Mir-15-P1c-v1  Mmu-Mir-15-P1c-v2  Mmu-Mir-15-P1c-v3  Mun-Mir-15-P1c  Oan-Mir-15-P1c  Ocu-Mir-15-P1c  Pbv-Mir-15-P1c  Rno-Mir-15-P1c3  Rno-Mir-15-P1c4  Sha-Mir-15-P1c  Spt-Mir-15-P1c  Tgu-Mir-15-P1c  Xla-Mir-15-P1c1  Xla-Mir-15-P1c2  Xtr-Mir-15-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(echTel2)		 JH980394: 616129-616187 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CCCCCUCCCUUCGUGGACCCCGGGGGGAUGCAGCAGCAAUUCAUGUUUUGGAGUGUUGUACAAAGUUCAAAACGUGAAGCGCUGCUACACCCCCUCGCGGGAAAAGUAGGAGGAGGGGU
Get precursor sequence
Structure
        10         20         30        40        50         
CCCCCUCCCUUCGUGGA-   -|      A  C      AA             GUGUUG 
                  CCC CGGGGGG UG AGCAGC  UUCAUGUUUUGGA      \
                  GGG GCUCCCC AC UCGUCG  AAGUGCAAAACUU      U
UGGGGAGGAGGAUGAAAA   C^      C  A      CG             GAAACA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Ete-Mir-15-P1c_5p
mirBase accessionNone
Sequence 
0- CAGCAGCAAUUCAUGUUUUGGA -22
Get sequence
Star sequence

Ete-Mir-15-P1c_3p*
mirBase accessionNone
Sequence 
37- CAAAACGUGAAGCGCUGCUACA -59
Get sequence