MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-144-v1

Family name MIR-144 (all species)
Seed GAUAUCA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-144-v2 
Orthologues Aca-Mir-144-v1  Ami-Mir-144  Bta-Mir-144-v1  Cfa-Mir-144-v1  Cja-Mir-144-v1  Cli-Mir-144-v1  Cmi-Mir-144  Cpi-Mir-144  Cpo-Mir-144-v1  Dno-Mir-144  Dre-Mir-144-v1  Ebu-Mir-144-v1  Eca-Mir-144-v1  Ete-Mir-144  Gga-Mir-144  Gja-Mir-144-v1  Gmo-Mir-144-v1  Hsa-Mir-144-v1  Laf-Mir-144  Lch-Mir-144  Loc-Mir-144-v1  Mdo-Mir-144  Mml-Mir-144  Mmr-Mir-144  Mmu-Mir-144-v1  Mun-Mir-144-v1  Neu-Mir-144-v1  Oan-Mir-144  Ocu-Mir-144-v1  Pab-Mir-144-v1  Pbv-Mir-144  Pma-Mir-144  Rno-Mir-144-v1  Sha-Mir-144  Spt-Mir-144  Sto-Mir-144  Tgu-Mir-144-v1  Tni-Mir-144  Xtr-Mir-144 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884735.1: 275834-275892 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUAAUGGUUAUGUCUUGUGCCCUGGACAGGAUAUCAUCUUAUACUGUAAGUUUAUUAAAGAGACACUACAGUAUAGAUGAUGUACUAUCCAGGGUCUCAUUCCUCCUCCAGCAAUAA
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Structure
        10         20         30        40        50         
UGCUAAUGGUUAUGUCU-  U-|       C  G         U        AGUUUAUU 
                  UG  GCCCUGGA AG AUAUCAUCU AUACUGUA        A
                  AC  UGGGACCU UC UGUAGUAGA UAUGACAU        A
AAUAACGACCUCCUCCUU  UC^       A  A         -        CACAGAGA 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-144-v1_5p
mirBase accessionNone
Sequence 
0- GGAUAUCAUCUUAUACUGUAAG -22
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Co-mature sequence

Mal-Mir-144-v1_3p
mirBase accessionNone
Sequence 
38- UACAGUAUAGAUGAUGUACUA -59
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