MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-144

Family name MIR-144 (all species)
Seed ACAGUAU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-144
Paralogues
Orthologues Aca-Mir-144-v1  Aca-Mir-144-v2  Ami-Mir-144  Bta-Mir-144-v1  Bta-Mir-144-v2  Cfa-Mir-144-v1  Cfa-Mir-144-v2  Cli-Mir-144-v1  Cli-Mir-144-v2  Cmi-Mir-144  Cpi-Mir-144  Cpo-Mir-144-v1  Cpo-Mir-144-v2  Dre-Mir-144-v1  Dre-Mir-144-v2  Ebu-Mir-144-v1  Ebu-Mir-144-v2  Ete-Mir-144  Gga-Mir-144  Gja-Mir-144-v1  Gja-Mir-144-v2  Gmo-Mir-144-v1  Gmo-Mir-144-v2  Hsa-Mir-144-v1  Hsa-Mir-144-v2  Lch-Mir-144  Loc-Mir-144-v1  Loc-Mir-144-v2  Mal-Mir-144-v1  Mal-Mir-144-v2  Mdo-Mir-144  Mml-Mir-144  Mmu-Mir-144-v1  Mmu-Mir-144-v2  Mun-Mir-144-v1  Mun-Mir-144-v2  Oan-Mir-144  Ocu-Mir-144-v1  Ocu-Mir-144-v2  Pbv-Mir-144  Pma-Mir-144  Rno-Mir-144-v1  Rno-Mir-144-v2  Sha-Mir-144  Spt-Mir-144  Sto-Mir-144  Tgu-Mir-144-v1  Tgu-Mir-144-v2  Tni-Mir-144  Xla-Mir-144-P1-v1  Xla-Mir-144-P1-v2  Xla-Mir-144-P2-v1  Xla-Mir-144-P2-v2  Xtr-Mir-144 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)
JH563368: 9611-9668 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUGUCCCGUCCCCUGCAGGGCCCUGGCUGGGAUAUCAUCAUAUACUGUAAGUUUGCAAUGAGAUACUACAGUAUAGAUGAUGUACUAGUCCGGGUACCCCAGCUCUGGAGCCUGACA
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Structure
        10        20          30        40        50         
CAUGUCCCGUCCCCUGCA   --|  U      G        A         AGUUUGCA 
                  GGG  CCC GGCUGG AUAUCAUC UAUACUGUA        \
                  CCC  GGG CUGAUC UGUAGUAG AUAUGACAU        A
ACAGUCCGAGGUCUCGAC   AU^  C      A        -         CAUAGAGU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Dno-Mir-144_5p*

mirBase accessionMIMAT0047661
Sequence
0- GGAUAUCAUCAUAUACUGUAAG -22
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Mature sequence

Dno-Mir-144_3p

mirBase accessionMIMAT0047662
Sequence
37- UACAGUAUAGAUGAUGUACUA -58
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