MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-144-v1

Family name MIR-144 (all species)
Seed GAUAUCA
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-144-v2 
Orthologues Aca-Mir-144-v1  Ami-Mir-144  Bta-Mir-144-v1  Cfa-Mir-144-v1  Cli-Mir-144-v1  Cmi-Mir-144  Cpi-Mir-144  Cpo-Mir-144-v1  Dno-Mir-144  Dre-Mir-144-v1  Ebu-Mir-144-v1  Eca-Mir-144-v1  Ete-Mir-144  Gga-Mir-144  Gja-Mir-144-v1  Gmo-Mir-144-v1  Hsa-Mir-144-v1  Laf-Mir-144  Lch-Mir-144  Loc-Mir-144-v1  Mal-Mir-144-v1  Mdo-Mir-144  Mml-Mir-144  Mmr-Mir-144  Mmu-Mir-144-v1  Mun-Mir-144-v1  Neu-Mir-144-v1  Oan-Mir-144  Ocu-Mir-144-v1  Pab-Mir-144-v1  Pbv-Mir-144  Pma-Mir-144  Rno-Mir-144-v1  Sha-Mir-144  Spt-Mir-144  Sto-Mir-144  Tgu-Mir-144-v1  Tni-Mir-144  Xtr-Mir-144 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021919.1: 100804311-100804368 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCCUGUGACCUCGAUGGGGCCCUGGCUGGGAUAUCAUCAUAUACUGUAAGUUUGCGAUGAGACACUACAGUAUAGAUGAUGUACUAGUCUGGGCACCCCCAGCUCUGGGGCCUGAC
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Structure
        10         20         30        40        50         
CUUCCUGUGACCUCGAU-   -|   U      G        A         AGUUUGCG 
                  GGG GCCC GGCUGG AUAUCAUC UAUACUGUA        \
                  CCC CGGG CUGAUC UGUAGUAG AUAUGACAU        A
CAGUCCGGGGUCUCGACC   A^   U      A        -         CACAGAGU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-144-v1_5p
mirBase accessionNone
Sequence 
0- GGAUAUCAUCAUAUACUGUAAG -22
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Co-mature sequence

Cja-Mir-144-v1_3p
mirBase accessionNone
Sequence 
37- UACAGUAUAGAUGAUGUACUA -58
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