MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-196-P3

Family name MIR-196 (all species)
Seed AGGUAGU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-196a-1
Paralogues Mml-Mir-196-P1  Mml-Mir-196-P4 
Orthologues Aca-Mir-196-P3  Ami-Mir-196-P3  Bta-Mir-196-P3  Cfa-Mir-196-P3  Cin-Mir-196  Cja-Mir-196-P3  Cli-Mir-196-P3  Cmi-Mir-196-P3  Cpi-Mir-196-P3  Cpo-Mir-196-P3  Dno-Mir-196-P3  Dre-Mir-196-P3a  Eca-Mir-196-P3  Gga-Mir-196-P3  Gja-Mir-196-P3  Hsa-Mir-196-P3  Laf-Mir-196-P3  Lch-Mir-196-P3  Loc-Mir-196-P3  Mal-Mir-196-P3a  Mdo-Mir-196-P3  Mmr-Mir-196-P3  Mmu-Mir-196-P3  Neu-Mir-196-P3  Ocu-Mir-196-P3  Pab-Mir-196-P3  Pbv-Mir-196-P3  Pma-Mir-196-o3  Rno-Mir-196-P3  Sha-Mir-196-P3  Spt-Mir-196-P3  Sto-Mir-196-P3  Tni-Mir-196-P3a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014351.1: 48163623-48163682 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAGAGCUUGAACUGGAACUGCUGAGUGAAUUAGGUAGUUUCAUGUUGUUGGGCCUGGGUUUCUGAACACAACAACAUUAAACCACCCGAUUCACGGCAGUUACUGCUCCUCGCUUAGCUG
Get precursor sequence
Structure
        10            20        30        40        50         
UAGAGCUUGAACUGGAA----|    GA      UA   A    C         GGCCUGGG 
                     CUGCU  GUGAAU  GGU GUUU AUGUUGUUG        U
                     GACGG  CACUUA  CCA CAAA UACAACAAC        U
GUCGAUUCGCUCCUCGUCAUU^    --      GC   C    U         ACAAGUCU 
.       110       100          90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-196-P3_5p
mirBase accessionMIMAT0002519
Sequence 
0- UAGGUAGUUUCAUGUUGUUGGG -22
Get sequence
Proposed targets TargetScanVert: mml-miR-196a-5p
Star sequence

Mml-Mir-196-P3_3p*
mirBase accessionNone
Sequence 
38- CAACAACAUUAAACCACCCGAU -60
Get sequence