MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-196-P3

Family name MIR-196 (all species)
Seed AGGUAGU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-196-P1 
Orthologues Aca-Mir-196-P3  Ami-Mir-196-P3  Bta-Mir-196-P3  Cfa-Mir-196-P3  Cin-Mir-196  Cja-Mir-196-P3  Cli-Mir-196-P3  Cmi-Mir-196-P3  Cpi-Mir-196-P3  Cpo-Mir-196-P3  Dno-Mir-196-P3  Dre-Mir-196-P3a  Eca-Mir-196-P3  Gga-Mir-196-P3  Gja-Mir-196-P3  Hsa-Mir-196-P3  Laf-Mir-196-P3  Lch-Mir-196-P3  Loc-Mir-196-P3  Mal-Mir-196-P3a  Mdo-Mir-196-P3  Mml-Mir-196-P3  Mmr-Mir-196-P3  Mmu-Mir-196-P3  Neu-Mir-196-P3  Ocu-Mir-196-P3  Pab-Mir-196-P3  Pbv-Mir-196-P3  Pma-Mir-196-o3  Rno-Mir-196-P3  Sha-Mir-196-P3  Spt-Mir-196-P3  Tni-Mir-196-P3a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_003427355_STO_add)		 BFAA01000145.1: 370520-370577 [-]
Precursor
(pre-Mir +30nt flank)
GCGCAAGUGAAAUGGAACUGUUGUGUGACUUAGGUAGUUUCAUGUUGUUGGGCUUCUGUUUGAUCGCAGUGACAGGAAACUGCCUGAAUUACUCCAGUUAUGGUCAUCGCAAACUUAU
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Structure
        10            20        30        40        50         
GCGCAAGUGAAAUGGAA----|  UUGU    C            A   UG   -  CUUCU 
                     CUG    GUGA UUAGGUAGUUUC UGU  UUG GG     \
                     GAC    CAUU AGUCCGUCAAAG ACA  GAC CU     G
UAUUCAAACGCUACUGGUAUU^  CU--    A            G   GU   G  AGUUU 
      110       100          90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-196-P3_5p
mirBase accessionNone
Sequence 
0- UAGGUAGUUUCAUGUUGUUGGG -22
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Star sequence

Sto-Mir-196-P3_3p* (predicted)
mirBase accessionNone
Sequence 
36- CAGUGACAGGAAACUGCCUGAA -58
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