MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-17-P1c

Family name MIR-17 (all species)
Seed AAAGUGC
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-17-P1a  Mun-Mir-17-P2a  Mun-Mir-17-P2c  Mun-Mir-17-P4a  Mun-Mir-17-P4d 
Orthologues Aca-Mir-17-P1c  Ami-Mir-17-P1c  Bta-Mir-17-P1c  Cfa-Mir-17-P1c  Cja-Mir-17-P1c  Cli-Mir-17-P1c  Cmi-Mir-17-P1c  Cpi-Mir-17-P1c  Cpo-Mir-17-P1c  Dno-Mir-17-P1c  Eca-Mir-17-P1c  Ete-Mir-17-P1c  Gga-Mir-17-P1c  Gja-Mir-17-P1c  Hsa-Mir-17-P1c  Laf-Mir-17-P1c  Lch-Mir-17-P1c  Loc-Mir-17-P1c  Mdo-Mir-17-P1c  Mml-Mir-17-P1c  Mmr-Mir-17-P1c  Mmu-Mir-17-P1c  Neu-Mir-17-P1c  Oan-Mir-17-P1c  Ocu-Mir-17-P1c  Pab-Mir-17-P1c  Pbv-Mir-17-P1c  Rno-Mir-17-P1c  Sha-Mir-17-P1c  Spt-Mir-17-P1c  Sto-Mir-17-P1c  Tgu-Mir-17-P1c  Xla-Mir-17-P1c3  Xla-Mir-17-P1c4  Xtr-Mir-17-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 17-P1c_LR594638.1:44966235-44966491: 101-157 [+]
Precursor
(pre-Mir +30nt flank)
GAUAAUUGGUAGUGGAUGCCUUAGUUAUGCAAAAGUGCUUACAGUGCAGGUAGUAUUCUGUACCUACUGCAAUGGAAGCACUUGCAGCCUUACUAUGGUGAUAAUGUUGGGCACCUA
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Structure
        10         20           30        40        50        
GAUAAUUGGUAGUGGAU-   U    UA---|   AA       A  G     G   UAUU 
                  GCC UAGU     UGCA  AGUGCUU CA UGCAG UAG    C
                  UGG AUCA     ACGU  UCACGAA GU ACGUC AUC    U
AUCCACGGGUUGUAAUAG   U    UUCCG^   --       G  A     -   CAUG 
     110       100        90          80        70         60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Mature sequence

Mun-Mir-17-P1c_5p
mirBase accessionNone
Sequence 
0- AAAAGUGCUUACAGUGCAGGUAG -23
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Star sequence

Mun-Mir-17-P1c_3p* (predicted)
mirBase accessionNone
Sequence 
35- ACUGCAAUGGAAGCACUUGCAG -57
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