| MirGeneDB ID | Neu-Mir-17-P2c |
|---|---|
| Family name | MIR-17 (all species) |
| Seed | AAGGUGC |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-17-P1a Neu-Mir-17-P1c Neu-Mir-17-P2a Neu-Mir-17-P4a Neu-Mir-17-P4c |
| Orthologues | Aca-Mir-17-P2c Ami-Mir-17-P2c Bta-Mir-17-P2c Cfa-Mir-17-P2c Cja-Mir-17-P2c Cli-Mir-17-P2c Cmi-Mir-17-P2c Cpi-Mir-17-P2c Cpo-Mir-17-P2c Dno-Mir-17-P2c Dre-Mir-17-P2c Eca-Mir-17-P2c Ete-Mir-17-P2c Gga-Mir-17-P2c Gja-Mir-17-P2c Gmo-Mir-17-P2c Hsa-Mir-17-P2c Laf-Mir-17-P2c Lch-Mir-17-P2c Loc-Mir-17-P2c Mdo-Mir-17-P2c Mml-Mir-17-P2c Mmr-Mir-17-P2c Mmu-Mir-17-P2c Mun-Mir-17-P2c Oan-Mir-17-P2c Ocu-Mir-17-P2c Pab-Mir-17-P2c Pbv-Mir-17-P2c Rno-Mir-17-P2c Sha-Mir-17-P2c Spt-Mir-17-P2c Sto-Mir-17-P2c Tgu-Mir-17-P2c Xla-Mir-17-P2c3 Xla-Mir-17-P2c4 Xtr-Mir-17-P2c |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 56057243-56057307 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCGUCUUGAUCCAUCAACUGUCCCUUGUGCUAAGGUGCAUCUAGUGCAGUUAGUGAUGUAGCUUAGUAUCUACUGCCCUAAAUGCUCCUUCUGGCACAAGCCGCCUCCUAGACAACCUGGCAAGCGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCGUCUUGAUCCAUCAACU-- CC --| U C U U UGAUGUA GU CUUGUGCUA AGG GCAU UAG GCAGU AG G CG GAACACGGU UCC CGUA AUC CGUCA UC C CGAACGGUCCAACAGAUCCUC CC CU^ U A C - UAUGAUU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Neu-Mir-17-P2c_5p |
| mirBase accession | None |
| Sequence |
0- UAAGGUGCAUCUAGUGCAGUUAG -23
Get sequence
|
| Star sequence | Neu-Mir-17-P2c_3p* (predicted) |
| mirBase accession | None |
| Sequence |
41- ACUGCCCUAAAUGCUCCUUCUGGC -65
Get sequence
|
