MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-17-P2c

Family name MIR-17 (all species)
Seed AAGGUGC
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-17-P1a  Neu-Mir-17-P1c  Neu-Mir-17-P2a  Neu-Mir-17-P4a  Neu-Mir-17-P4c 
Orthologues Aca-Mir-17-P2c  Ami-Mir-17-P2c  Bta-Mir-17-P2c  Cfa-Mir-17-P2c  Cja-Mir-17-P2c  Cli-Mir-17-P2c  Cmi-Mir-17-P2c  Cpi-Mir-17-P2c  Cpo-Mir-17-P2c  Dno-Mir-17-P2c  Dre-Mir-17-P2c  Eca-Mir-17-P2c  Ete-Mir-17-P2c  Gga-Mir-17-P2c  Gja-Mir-17-P2c  Gmo-Mir-17-P2c  Hsa-Mir-17-P2c  Laf-Mir-17-P2c  Lch-Mir-17-P2c  Loc-Mir-17-P2c  Mdo-Mir-17-P2c  Mml-Mir-17-P2c  Mmr-Mir-17-P2c  Mmu-Mir-17-P2c  Mun-Mir-17-P2c  Oan-Mir-17-P2c  Ocu-Mir-17-P2c  Pab-Mir-17-P2c  Pbv-Mir-17-P2c  Rno-Mir-17-P2c  Sha-Mir-17-P2c  Spt-Mir-17-P2c  Sto-Mir-17-P2c  Tgu-Mir-17-P2c  Xla-Mir-17-P2c3  Xla-Mir-17-P2c4  Xtr-Mir-17-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 56057243-56057307 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGUCUUGAUCCAUCAACUGUCCCUUGUGCUAAGGUGCAUCUAGUGCAGUUAGUGAUGUAGCUUAGUAUCUACUGCCCUAAAUGCUCCUUCUGGCACAAGCCGCCUCCUAGACAACCUGGCAAGC
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Structure
        10          20        30          40        50        60 
CCGUCUUGAUCCAUCAACU--  CC         --|  U    C   U     U  UGAUGUA 
                     GU  CUUGUGCUA  AGG GCAU UAG GCAGU AG       G
                     CG  GAACACGGU  UCC CGUA AUC CGUCA UC       C
CGAACGGUCCAACAGAUCCUC  CC         CU^  U    A   C     -  UAUGAUU 
   120       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-17-P2c_5p
mirBase accessionNone
Sequence 
0- UAAGGUGCAUCUAGUGCAGUUAG -23
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Star sequence

Neu-Mir-17-P2c_3p* (predicted)
mirBase accessionNone
Sequence 
41- ACUGCCCUAAAUGCUCCUUCUGGC -65
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