MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-19-P2a

Family name MIR-19 (all species)
Seed GUGCAAA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-19-P1a  Mun-Mir-19-P2c  Mun-Mir-19-P2d 
Orthologues Aca-Mir-19-P2a  Ami-Mir-19-P2a  Bta-Mir-19-P2a  Cfa-Mir-19-P2a  Cja-Mir-19-P2a  Cli-Mir-19-P2a  Cmi-Mir-19-P2a  Cpi-Mir-19-P2a  Cpo-Mir-19-P2a  Dno-Mir-19-P2a  Dre-Mir-19-P2a1  Dre-Mir-19-P2a2  Eca-Mir-19-P2a  Ete-Mir-19-P2a  Gga-Mir-19-P2a  Gja-Mir-19-P2a  Gmo-Mir-19-P2a1  Gmo-Mir-19-P2a2  Hsa-Mir-19-P2a  Laf-Mir-19-P2a  Lch-Mir-19-P2a  Loc-Mir-19-P2a  Mal-Mir-19-P2a1  Mal-Mir-19-P2a2  Mdo-Mir-19-P2a  Mml-Mir-19-P2a  Mmr-Mir-19-P2a  Mmu-Mir-19-P2a  Oan-Mir-19-P2a5  Oan-Mir-19-P2a6  Ocu-Mir-19-P2a  Pab-Mir-19-P2a  Pbv-Mir-19-P2a  Rno-Mir-19-P2a  Sha-Mir-19-P2a  Spt-Mir-19-P2a  Sto-Mir-19-P2a  Tgu-Mir-19-P2a  Tni-Mir-19-P2a1  Tni-Mir-19-P2a2  Xla-Mir-19-P2a3  Xla-Mir-19-P2a4  Xtr-Mir-19-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 19-P2a_LR594635.1:137686643-137686903: 101-161 [+]
Precursor
(pre-Mir +30nt flank)
ACGGUCUUUUUUGAACACUGUUCUCUGGUUAGUUUUGCAGGUUUGCAUUAGCUGUGCAGUUAUGUUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGCAGUGGCAAAGGCAGUAGGCAUGC
Get precursor sequence
Structure
        10            20        30         40         50         
ACGGUCUUUUUUGAACA----|    CUC              -  -       U   UGUGCA 
                     CUGUU   UGGUUAGUUUUGCA GG UUUGCAU AGC      G
                     GACGG   GUCAGUCAAAACGU CC AAACGUG UCG      U
CGUACGGAUGACGGAAACGGU^    U--              A  U       -   UUGUAU 
 .       110       100          90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Star sequence

Mun-Mir-19-P2a_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUUUUGCAGGUUUGCAUUAGC -22
Get sequence
Mature sequence

Mun-Mir-19-P2a_3p
mirBase accessionNone
Sequence 
38- UGUGCAAAUCCAUGCAAAACUGA -61
Get sequence