MirGeneDB 2.1
MirGeneDB ID

Spt-Mir-19-P2a

Family name MIR-19 (all species)
Seed GUGCAAA
Species Tuatara (Sphenodon punctatus)
MiRBase ID
Paralogues Spt-Mir-19-P1a  Spt-Mir-19-P2c 
Orthologues Aca-Mir-19-P2a  Ami-Mir-19-P2a  Bta-Mir-19-P2a  Cfa-Mir-19-P2a  Cli-Mir-19-P2a  Cmi-Mir-19-P2a  Cpi-Mir-19-P2a  Cpo-Mir-19-P2a  Dno-Mir-19-P2a  Dre-Mir-19-P2a1  Dre-Mir-19-P2a2  Ete-Mir-19-P2a  Gga-Mir-19-P2a  Gja-Mir-19-P2a  Gmo-Mir-19-P2a1  Gmo-Mir-19-P2a2  Hsa-Mir-19-P2a  Lch-Mir-19-P2a  Loc-Mir-19-P2a  Mal-Mir-19-P2a1  Mal-Mir-19-P2a2  Mdo-Mir-19-P2a  Mml-Mir-19-P2a  Mmu-Mir-19-P2a  Mun-Mir-19-P2a  Oan-Mir-19-P2a5  Oan-Mir-19-P2a6  Ocu-Mir-19-P2a  Pbv-Mir-19-P2a  Rno-Mir-19-P2a  Sha-Mir-19-P2a  Sto-Mir-19-P2a  Tgu-Mir-19-P2a  Tni-Mir-19-P2a1  Tni-Mir-19-P2a2  Xla-Mir-19-P2a3  Xla-Mir-19-P2a4  Xtr-Mir-19-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003113815.1_ASM311381v1_TUATARA)		 QEPC01001394.1: 2548240-2548300 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUGAGUCAAGUGAACACUGUUCUCUGGUUAGUUUUGCAGGUUUGCAUCCAGCUGUAUGAUACUCUGCUGUGCAAAUCCAUGCAAAACUGACUGUGGCAGUGACAAGUCAGUGAAAAAGUG
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Structure
        10            20        30         40         50          
UGUGAGUCAAGUGAACA----|    CUC              -  -      UC    UGUAUG 
                     CUGUU   UGGUUAGUUUUGCA GG UUUGCA  CAGC      \
                     GACGG   GUCAGUCAAAACGU CC AAACGU  GUCG      A
GUGAAAAAGUGACUGAACAGU^    U--              A  U      --    UCUCAU 
 .       110       100          90        80          70
Deep sequencing
3' NTU Unknown
MotifsUGUG in loop
Star sequence

Spt-Mir-19-P2a_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUUUUGCAGGUUUGCAUCCAGC -23
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Mature sequence

Spt-Mir-19-P2a_3p (predicted)
mirBase accessionNone
Sequence 
38- UGUGCAAAUCCAUGCAAAACUGA -61
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