MirGeneDB 2.1
MirGeneDB ID

Dno-Mir-1388

Family name MIR-1388 (all species)
Seed GGACUGU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-1388
Paralogues
Orthologues Aca-Mir-1388  Ami-Mir-1388  Bta-Mir-1388  Cfa-Mir-1388  Cli-Mir-1388  Cmi-Mir-1388  Cpi-Mir-1388  Cpo-Mir-1388  Dre-Mir-1388  Ete-Mir-1388  Gga-Mir-1388  Gja-Mir-1388  Gmo-Mir-1388  Lch-Mir-1388  Loc-Mir-1388  Mal-Mir-1388  Mdo-Mir-1388  Mun-Mir-1388  Oan-Mir-1388-v1  Oan-Mir-1388-v2  Pbv-Mir-1388  Sha-Mir-1388  Spt-Mir-1388  Sto-Mir-1388  Tgu-Mir-1388  Tni-Mir-1388  Xla-Mir-1388-P1  Xla-Mir-1388-P2  Xtr-Mir-1388 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(dasNov3)		 JH569290: 395897-395955 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGAAGCCCCUGCCCUGGGCAGUGCCCCCAGGACUGUCCAACCUGAGAAUGGUGAGUCCAGGGUCCAUCUCAGGCUCGUCAGCCCGUGAGGUGCUGCCCCCUCCCCAGCGCUGCCGGA
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Structure
        10          20        30        40        50         
GGAGAAGCCCCUGCCCU--|     UG  CCCA  A   UCCAA       A  GUGAGU 
                   GGGCAG  CC    GG CUG     CCUGAGA UG      C
                   CCCGUC  GG    CC GAC     GGACUCU AC      C
AGGCCGUCGCGACCCCUCC^     GU  AGUG  C   UGCUC       -  CUGGGA 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Dno-Mir-1388_5p
mirBase accessionMIMAT0048049
Sequence 
0- AGGACUGUCCAACCUGAGAAUG -22
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Star sequence

Dno-Mir-1388_3p*
mirBase accessionMIMAT0048050
Sequence 
37- AUCUCAGGCUCGUCAGCCCGUG -59
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