MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-1388

Family name MIR-1388 (all species)
Seed GGACUGU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Aca-Mir-1388  Ami-Mir-1388  Bta-Mir-1388  Cfa-Mir-1388  Cli-Mir-1388  Cmi-Mir-1388  Cpi-Mir-1388  Cpo-Mir-1388  Dno-Mir-1388  Dre-Mir-1388  Eca-Mir-1388  Eca-Mir-1388-as  Ete-Mir-1388  Gga-Mir-1388  Gja-Mir-1388  Gmo-Mir-1388  Laf-Mir-1388  Lch-Mir-1388  Loc-Mir-1388  Mal-Mir-1388  Mdo-Mir-1388  Mmr-Mir-1388  Oan-Mir-1388-v1  Oan-Mir-1388-v2  Pbv-Mir-1388  Sha-Mir-1388  Spt-Mir-1388  Sto-Mir-1388  Tgu-Mir-1388  Tni-Mir-1388  Xla-Mir-1388-P1  Xla-Mir-1388-P2  Xtr-Mir-1388 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(Mun_miRNA_loci)		 1388_LR594639.1:196089260-196089399: 40-101 [-]
Precursor
(pre-Mir +30nt flank)
UCUGAUAAUGAACACCUGAGGAGCAUUUCUAGGACUGUCUAACCUGAGAAUGGGGAAGCAAGAAGGUCAAUCUCAGGUUCGUCAGCCCAUGAAAUGCUUUCUCUACAGCAAGAGACUGCACA
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Structure
        10          20         30        40        50          
UCUGAUAAUGAACACCU--   -|        UA  A   UCU         A  GGGAAGC 
                   GAG GAGCAUUUC  GG CUG   AACCUGAGA UG       \
                   CUC UUCGUAAAG  CC GAC   UUGGACUCU AC       A
ACACGUCAGAGAACGACAU   U^        UA  C   UGC         A  UGGAAGA 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Mature sequence

Mun-Mir-1388_5p
mirBase accessionNone
Sequence 
0- AGGACUGUCUAACCUGAGAAUG -22
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Star sequence

Mun-Mir-1388_3p*
mirBase accessionNone
Sequence 
39- AUCUCAGGUUCGUCAGCCCAUGA -62
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