MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-1388

Family name MIR-1388 (all species)
Seed GGGCUGU
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-1388
Paralogues
Orthologues Aca-Mir-1388  Ami-Mir-1388  Bta-Mir-1388  Cfa-Mir-1388  Cli-Mir-1388  Cmi-Mir-1388  Cpi-Mir-1388  Cpo-Mir-1388  Dno-Mir-1388  Dre-Mir-1388  Eca-Mir-1388  Eca-Mir-1388-as  Ete-Mir-1388  Gga-Mir-1388  Gja-Mir-1388  Gmo-Mir-1388  Laf-Mir-1388  Lch-Mir-1388  Loc-Mir-1388  Mal-Mir-1388  Mdo-Mir-1388  Mun-Mir-1388  Oan-Mir-1388-v1  Oan-Mir-1388-v2  Pbv-Mir-1388  Sha-Mir-1388  Spt-Mir-1388  Sto-Mir-1388  Tgu-Mir-1388  Tni-Mir-1388  Xla-Mir-1388-P1  Xla-Mir-1388-P2  Xtr-Mir-1388 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007678.1: 56628819-56628879 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUCUGCCAGCUGCCCCGGGCAGCACCUCCAGGGCUGUCCAACCUGAGAAUGGUGAGUCUCCAGGGUCAAUCUCAGGUUCGUCAGCCCGUGAGGUGCCGCCCCUUCCCCACGGAGUCUGAC
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Structure
        10          20        30        40        50          
GCUCUGCCAGCUGCCCC--|   A       CA      UCC         A  GUGAGUC 
                   GGGC GCACCUC  GGGCUG   AACCUGAGA UG       \
                   CCCG CGUGGAG  CCCGAC   UUGGACUCU AC       U
CAGUCUGAGGCACCCCUUC^   C       UG      UGC         A  UGGGACC 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-1388_5p
mirBase accessionNone
Sequence 
0- AGGGCUGUCCAACCUGAGAAUG -22
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Co-mature sequence

Mmr-Mir-1388_3p
mirBase accessionMIMAT0049162
Sequence 
39- AUCUCAGGUUCGUCAGCCCGUG -61
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