MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-17-P4c

Family name MIR-17 (all species)
Seed AAAGUGC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-17-P1a  Ete-Mir-17-P1c  Ete-Mir-17-P1d  Ete-Mir-17-P2a  Ete-Mir-17-P2c  Ete-Mir-17-P4a  Ete-Mir-17-P4d 
Orthologues Aca-Mir-17-P4c  Ami-Mir-17-P4c  Bta-Mir-17-P4c  Cfa-Mir-17-P4c  Cja-Mir-17-P4c  Cli-Mir-17-P4c  Cmi-Mir-17-P4c  Cpi-Mir-17-P4c  Cpo-Mir-17-P4c  Dno-Mir-17-P4c  Dre-Mir-17-P4c  Eca-Mir-17-P4c  Gga-Mir-17-P4c  Gja-Mir-17-P4c  Gmo-Mir-17-P4c  Hsa-Mir-17-P4c  Laf-Mir-17-P4c  Lch-Mir-17-P4c  Loc-Mir-17-P4c  Mal-Mir-17-P4c  Mdo-Mir-17-P4c  Mml-Mir-17-P4c  Mmr-Mir-17-P4c  Mmu-Mir-17-P4c  Neu-Mir-17-P4c  Oan-Mir-17-P4c  Ocu-Mir-17-P4c  Pab-Mir-17-P4c  Pbv-Mir-17-P4c  Rno-Mir-17-P4c  Sha-Mir-17-P4c  Spt-Mir-17-P4c  Sto-Mir-17-P4c  Tgu-Mir-17-P4c  Xla-Mir-17-P4c3  Xla-Mir-17-P4c4  Xtr-Mir-17-P4c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980394: 1010443-1010503 [+] UCSC
Precursor
(pre-Mir +30nt flank)
ACAAAGGACAAAGAUCAGUCCUAGCGGUACCAAAGUGCUCAUAGUGCAGGUAGUUUUUAUAUUGCUCUACUGCGGUAUGGGCACUUUCAGUACUCUUGGAUAAUGAAUCCCUUGGUCCUGG
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Structure
        10           20        30         40        50          
ACAAAGGACAAAGAUCA---|   U  C     C-            G     G   UUUUUA 
                    GUCC AG GGUAC  AAAGUGCUCAUA UGCAG UAG      \
                    UAGG UC UCAUG  UUUCACGGGUAU GCGUC AUC      U
GGUCCUGGUUCCCUAAGUAA^   U  -     AC            G     -   UCGUUA 
 .       110       100         90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Ete-Mir-17-P4c_5p
mirBase accessionNone
Sequence 
0- CAAAGUGCUCAUAGUGCAGGUAG -23
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Star sequence

Ete-Mir-17-P4c_3p* (predicted)
mirBase accessionNone
Sequence 
38- ACUGCGGUAUGGGCACUUUCAGU -61
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