MirGeneDB 3.0
141 microRNA genes with seed GAUUGUC
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aae-Mir-219 aae-mir-219 MIR-219 GAUUGUC MIMAT0014307 None supercont1.368 610337 610404 + Bilateria Bilateria No 1
Bfl-Mir-219 bfl-mir-219 MIR-219 GAUUGUC MIMAT0010012 None NC_049986.1 24495117 24495175 + Bilateria Bilateria Unknown 1
Bge-Mir-219 None MIR-219 GAUUGUC None None KZ614940.1 254374 254433 - Bilateria Bilateria No 1
Bko-Mir-219 None MIR-219 GAUUGUC None None PJRA01000263.1 3082814 3082874 - Bilateria Bilateria Unknown 1
Bla-Mir-219 None MIR-219 GAUUGUC None None Sc0000004 7222896 7222954 + Bilateria Bilateria No 1
Bpl-Mir-219 None MIR-219 GAUUGUC None None QEOQ01000451.1 276104 276163 - Bilateria Bilateria No 1
Cin-Mir-219 cin-mir-219 MIR-219 GAUUGUC MIMAT0006113 MIMAT0015264 7 4370293 4370349 - Bilateria Bilateria Unknown 1 1
Csc-Mir-219 None MIR-219 GAUUGUC None None NW_019385571.1 97769 97827 + Bilateria Bilateria Unknown 1
Cte-Mir-219 cte-mir-219 MIR-219 GAUUGUC MIMAT0009556 None CAPTEscaffold_273 18981 19041 + Bilateria Bilateria No 1
Dan-Mir-219 dan-mir-219 MIR-219 GAUUGUC MIMAT0008474 None scaffold_13337 8265367 8265428 + Bilateria Bilateria No 1
Dgr-Mir-219 None MIR-219 GAUUGUC None None CAJFCJ010000004.1 1422947 1423005 - Bilateria Bilateria Unknown
Dlo-Mir-219 None MIR-219 GAUUGUC None None NC_087235.1 6710073 6710136 - Bilateria Bilateria No 1
Dme-Mir-219 dme-mir-219 MIR-219 GAUUGUC MIMAT0000335 MIMAT0020803 3L 17315024 17315085 + Bilateria Bilateria No 1
Dmo-Mir-219 dmo-mir-219 MIR-219 GAUUGUC MIMAT0008638 None scaffold_6680 4316926 4316988 - Bilateria Bilateria No 1
Dpu-Mir-219 dpu-mir-219 MIR-219 GAUUGUC MIMAT0012645 None DAPPUscaffold_253 93596 93656 - Bilateria Bilateria No 1
Dsi-Mir-219 dsi-mir-219 MIR-219 GAUUGUC MIMAT0008868 None 3L 16883503 16883564 + Bilateria Bilateria No 1
Dya-Mir-219 dya-mir-219 MIR-219 GAUUGUC MIMAT0009107 None 3L 16762607 16762668 - Bilateria Bilateria No 1
Eba-Mir-219 None MIR-219 GAUUGUC None None WURV02106657.1 2641 2698 - Bilateria Bilateria Unknown 1
Egr-Mir-219 egr-mir-219 MIR-219 GAUUGUC MIMAT0020246 MIMAT0037430 APAU02000015.1 1031610 1031684 - Bilateria Bilateria No 1 1
Gpa-Mir-219 None MIR-219 GAUUGUC None None Scaffold8 1087959 1088022 - Bilateria Bilateria No 1
Gsa-Mir-219 gsa-mir-219 MIR-219 GAUUGUC MIMAT0035264 MIMAT0035265 scf7180006949674 6907 6977 - Bilateria Bilateria No 1
Gsp-Mir-219 None MIR-219 GAUUGUC None None OX940784.1 11030098 11030169 - Bilateria Bilateria Unknown
Hmi-Mir-219 None MIR-219 GAUUGUC None None SCFE01000306.1 887731 887782 - Bilateria Bilateria Unknown 1
Hru-Mir-219 None MIR-219 GAUUGUC None None JALGQA010000008.1 1926308 1926366 - Bilateria Bilateria No 1
Isc-Mir-219 isc-mir-219 MIR-219 GAUUGUC MIMAT0012690 None NW_024609868.1 46492192 46492250 + Bilateria Bilateria No 1
Lan-Mir-219 None MIR-219 GAUUGUC None None LFEI01000847 28789 28851 - Bilateria Bilateria No 1
Mgi-Mir-219 None MIR-219 GAUUGUC None None scaffold517 74689 74747 + Bilateria Bilateria No
Obi-Mir-219 None MIR-219 GAUUGUC None None KQ429255 139487 139544 - Bilateria Bilateria No 1
Ovu-Mir-219 None MIR-219 GAUUGUC None None RXHP01058932.1 4223 4280 + Bilateria Bilateria No 1
Pau-Mir-219 None MIR-219 GAUUGUC None None NMRA01000206.1 120684 120741 - Bilateria Bilateria No
Pca-Mir-219 None MIR-219 GAUUGUC None None KQ715579.1 98420 98481 + Bilateria Bilateria Unknown 1
Pcr-Mir-219 None MIR-219 GAUUGUC None None CAJQUW010001386.1 105644 105705 + Bilateria Bilateria No 1
Pfl-Mir-219 None MIR-219 GAUUGUC None None LD345001.1 105047 105112 - Bilateria Bilateria Unknown 1 1
Pmi-Mir-219 pmi-mir-219 MIR-219 GAUUGUC MIMAT0032168 None JH776188.1 5024 5085 + Bilateria Bilateria No 1
Rph-Mir-219 None MIR-219 GAUUGUC None None QUSP01003057.1 48067 48123 - Bilateria Bilateria No
Sko-Mir-219 sko-mir-219 MIR-219 GAUUGUC MIMAT0022768 None NW_003111333.1 5536 5597 - Bilateria Bilateria Unknown 1 1
Sma-Mir-219 sma-mir-219 MIR-219 GAUUGUC MIMAT0033504 MIMAT0033505 HE601624.3 9217024 9217120 - Bilateria Bilateria Unknown 1
Sne-Mir-219 None MIR-219 GAUUGUC None None k141_4847 7804 7901 + Bilateria Bilateria Unknown
Snu-Mir-219 None MIR-219 GAUUGUC None None CM049310.1 32691799 32691857 + Bilateria Bilateria Unknown 1
Spu-Mir-219 spu-mir-219 MIR-219 GAUUGUC MIMAT0009685 MIMAT0022953 AAGJ06000004.1 25977850 25977910 - Bilateria Bilateria No 1
Sro-Mir-219 None MIR-219 GAUUGUC None None JANVAR010000637.1 3719536 3719633 - Bilateria Bilateria No
Tca-Mir-219 tca-mir-219 MIR-219 GAUUGUC MIMAT0008377 MIMAT0019121 LG3 5656978 5657037 + Bilateria Bilateria No 1
Tur-Mir-219 None MIR-219 GAUUGUC None None HE587305.1 3464891 3464953 - Bilateria Bilateria No
Pma-Mir-219-o1 None MIR-219 GAUUGUC None None NW_022638164.1 322376 322438 - P. marinus Bilateria Unknown 1
Pma-Mir-219-o2 None MIR-219 GAUUGUC None None NC_046127.1 7380300 7380363 - P. marinus Bilateria Unknown 1
Aca-Mir-219-P2 aca-mir-219-1 MIR-219 GAUUGUC MIMAT0021884 MIMAT0021885 GL344072.1 36997 37061 + Gnathostomata Bilateria No 1
Ami-Mir-219-P2 ami-mir-219b MIR-219 GAUUGUC MIMAT0038250 MIMAT0038251 NW_017713629.1 13580119 13580185 + Gnathostomata Bilateria No 1
Bta-Mir-219-P2 bta-mir-219-1 MIR-219 GAUUGUC None MIMAT0012547 NC_037338.1 98985288 98985352 - Gnathostomata Bilateria No 1
Cfa-Mir-219-P2 cfa-mir-219-2 MIR-219 GAUUGUC MIMAT0006611 MIMAT0006729 chr9 55139107 55139171 + Gnathostomata Bilateria No 1
Cja-Mir-219-P2 None MIR-219 GAUUGUC None None CM021915.1 174050770 174050834 - Gnathostomata Bilateria Unknown 1
Cli-Mir-219-P2 None MIR-219 GAUUGUC None None scaffold2035 7056 7122 + Gnathostomata Bilateria No 1
Cmi-Mir-219-P2 None MIR-219 GAUUGUC None None KI635931.1 2921759 2921825 - Gnathostomata Bilateria No 1
Cpi-Mir-219-P2 cpi-mir-219-2 MIR-219 GAUUGUC MIMAT0037848 MIMAT0037849 JH584612 7848477 7848543 - Gnathostomata Bilateria No 1
Cpo-Mir-219-P2 cpo-mir-219b MIR-219 GAUUGUC MIMAT0047128 MIMAT0047129 scaffold_27 3805724 3805788 + Gnathostomata Bilateria No 1
Dno-Mir-219-P2 dno-mir-219b MIR-219 GAUUGUC MIMAT0047773 MIMAT0047774 JH564958 47850 47914 + Gnathostomata Bilateria No 1
Eca-Mir-219-P2 eca-mir-219-2 MIR-219 GAUUGUC MIMAT0013099 None CM009172.1 32252444 32252508 - Gnathostomata Bilateria No 1
Ete-Mir-219-P2 None MIR-219 GAUUGUC None None JH980366 6232915 6232979 + Gnathostomata Bilateria No 1
Gga-Mir-219-P2 gga-mir-219a MIR-219 GAUUGUC MIMAT0001170 None 17 5319595 5319661 + Gnathostomata Bilateria No 1
Gja-Mir-219-P2 None MIR-219 GAUUGUC None None NW_015176565.1 28039 28105 + Gnathostomata Bilateria No 1
Hsa-Mir-219-P2 hsa-mir-219a-2 MIR-219 GAUUGUC MIMAT0000276 MIMAT0004675 chr9 128392632 128392696 - Gnathostomata Bilateria No 1
Laf-Mir-219-P2 None MIR-219 GAUUGUC None None GL010033.1 29710403 29710467 + Gnathostomata Bilateria Unknown 1
Lch-Mir-219-P2 None MIR-219 GAUUGUC None None JH126677.1 1821790 1821855 + Gnathostomata Bilateria Unknown 1
Loc-Mir-219-P2 None MIR-219 GAUUGUC None None LG21 3510032 3510098 + Gnathostomata Bilateria No 1
Mdo-Mir-219-P2 mdo-mir-219-1 MIR-219 GAUUGUC MIMAT0004134 MIMAT0026681 1 454138621 454138685 - Gnathostomata Bilateria No 1
Mml-Mir-219-P2 mml-mir-219-2 MIR-219 GAUUGUC MIMAT0006245 MIMAT0006246 CM014350.1 12193192 12193256 + Gnathostomata Bilateria No 1
Mmr-Mir-219-P2 None MIR-219 GAUUGUC None None CM007670.1 90401037 90401101 - Gnathostomata Bilateria No 1
Mmu-Mir-219-P2 mmu-mir-219a-2 MIR-219 GAUUGUC MIMAT0000664 MIMAT0022841 chr2 29845645 29845709 - Gnathostomata Bilateria No 1
Mun-Mir-219-P2 None MIR-219 GAUUGUC None None 219-P1_LR594637.1:295957569-295957703 35 101 - Gnathostomata Bilateria Unknown 1
Neu-Mir-219-P2 None MIR-219 GAUUGUC None None CM051813.1 479692445 479692509 - Gnathostomata Bilateria Unknown 1
Oan-Mir-219-P2 oan-mir-219 MIR-219 GAUUGUC MIMAT0006899 MIMAT0006900 NC_041731.1 32222732 32222796 + Gnathostomata Bilateria No 1
Ocu-Mir-219-P2 ocu-mir-219b MIR-219 GAUUGUC MIMAT0048352 MIMAT0048353 chrUn0149 254882 254946 + Gnathostomata Bilateria No 1
Pab-Mir-219-P2 None MIR-219 GAUUGUC None None CM054692.2 119716320 119716384 - Gnathostomata Bilateria No 1
Rno-Mir-219-P2 rno-mir-219a-2 MIR-219 GAUUGUC MIMAT0000889 MIMAT0005446 chr3 8407443 8407507 - Gnathostomata Bilateria No 1
Sha-Mir-219-P2 None MIR-219 GAUUGUC None None AFEY01342777_Mir-219-P2 894 958 + Gnathostomata Bilateria No 1
Spt-Mir-219-P2 None MIR-219 GAUUGUC None None QEPC01005805.1 4884376 4884442 - Gnathostomata Bilateria Unknown 1
Sto-Mir-219-P2 None MIR-219 GAUUGUC None None BFAA01005837.1 16504 16569 + Gnathostomata Bilateria No
Tgu-Mir-219-P2 tgu-mir-219b MIR-219 GAUUGUC None MIMAT0014464 17 5804932 5804998 + Gnathostomata Bilateria No 1
Xtr-Mir-219-P2 xtr-mir-219 MIR-219 GAUUGUC MIMAT0003632 None chr8 7839296 7839362 + Gnathostomata Bilateria No 1
Dre-Mir-219-P2a dre-mir-219-1 MIR-219 GAUUGUC MIMAT0001286 None chr10 10329476 10329540 - Clupeocephala Bilateria No 1
Gmo-Mir-219-P2a gmo-mir-219-2 MIR-219 GAUUGUC None MIMAT0044227 GeneScaffold_3565 236428 236495 - Clupeocephala Bilateria No 1
Mal-Mir-219-P2a None MIR-219 GAUUGUC None None KV884763.1 1243351 1243417 - Clupeocephala Bilateria No 1
Tni-Mir-219-P2a None MIR-219 GAUUGUC None None 4 1194347 1194413 + Clupeocephala Bilateria Unknown 1
Dre-Mir-219-P2b dre-mir-219-2 MIR-219 GAUUGUC MIMAT0001286 None chr5 65101371 65101437 + Clupeocephala Bilateria No 1 1
Mal-Mir-219-P2b None MIR-219 GAUUGUC None None KV884714.1 2562206 2562271 + Clupeocephala Bilateria No 1 1 1
Tni-Mir-219-P2b tni-mir-219-1 MIR-219 GAUUGUC MIMAT0002901 None 12 10155057 10155122 - Clupeocephala Bilateria Unknown 1 1
Xla-Mir-219-P2c None MIR-219 GAUUGUC None None NC_030739.1 32552450 32552516 - X. laevis Bilateria No 1
Xla-Mir-219-P2d None MIR-219 GAUUGUC None None NW_016694827.1 651974 652040 - X. laevis Bilateria No 1 1
Aca-Mir-219-P3 aca-mir-219-2 MIR-219 GAUUGUC MIMAT0021884 MIMAT0021886 GL344404.1 891 949 - Gnathostomata Bilateria No 1
Ami-Mir-219-P3 ami-mir-219a MIR-219 GAUUGUC MIMAT0038248 MIMAT0038249 NW_017711269.1 103736 103791 - Gnathostomata Bilateria No 1 1 1
Bta-Mir-219-P3 bta-mir-219-2 MIR-219 GAUUGUC None MIMAT0030444 NC_037350.1 7394820 7394882 + Gnathostomata Bilateria No 1
Cfa-Mir-219-P3 cfa-mir-219-1 MIR-219 GAUUGUC MIMAT0006611 None chr12 2670928 2670991 + Gnathostomata Bilateria No 1
Cja-Mir-219-P3 None MIR-219 GAUUGUC None None CM021918.1 37540416 37540479 + Gnathostomata Bilateria Unknown 1
Cmi-Mir-219-P3 None MIR-219 GAUUGUC None None AAVX02055268.1 1010 1073 + Gnathostomata Bilateria Unknown 1
Cpi-Mir-219-P3 cpi-mir-219-1 MIR-219 GAUUGUC MIMAT0037848 None JH584591 148663 148719 + Gnathostomata Bilateria No 1 1 1
Cpo-Mir-219-P3 None MIR-219 GAUUGUC None None 1646358196 140 203 + Gnathostomata Bilateria No 1
Dno-Mir-219-P3 dno-mir-219a MIR-219 GAUUGUC MIMAT0047771 MIMAT0047772 JH578991 782596 782658 - Gnathostomata Bilateria No 1
Eca-Mir-219-P3 eca-mir-219-1 MIR-219 GAUUGUC MIMAT0013099 None CM009167.1 34558902 34558964 + Gnathostomata Bilateria No 1
Ete-Mir-219-P3 None MIR-219 GAUUGUC None None JH980348 13433336 13433398 + Gnathostomata Bilateria Unknown 1
Gja-Mir-219-P3 None MIR-219 GAUUGUC None None NW_015167179.1 32413 32469 + Gnathostomata Bilateria Unknown 1
Hsa-Mir-219-P3 hsa-mir-219a-1 MIR-219 GAUUGUC MIMAT0000276 MIMAT0004567 chr6 33207855 33207917 + Gnathostomata Bilateria Yes 1
Laf-Mir-219-P3 None MIR-219 GAUUGUC None None GL010132.1 2731782 2731844 - Gnathostomata Bilateria No 1
Lch-Mir-219-P3 None MIR-219 GAUUGUC None None JH127214.1 746139 746204 - Gnathostomata Bilateria Unknown 1 1
Mdo-Mir-219-P3 mdo-mir-219-2 MIR-219 GAUUGUC MIMAT0004134 MIMAT0031109 2 270698645 270698704 + Gnathostomata Bilateria Unknown 1
Mml-Mir-219-P3 mml-mir-219-1 MIR-219 GAUUGUC MIMAT0002575 None CM014339.1 136298677 136298740 - Gnathostomata Bilateria No 1
Mmr-Mir-219-P3 None MIR-219 GAUUGUC None None CM007666.1 3173775 3173837 + Gnathostomata Bilateria No 1
Mmu-Mir-219-P3 mmu-mir-219a-1 MIR-219 GAUUGUC MIMAT0000664 MIMAT0017055 chr17 34025010 34025072 - Gnathostomata Bilateria No 1
Neu-Mir-219-P3 None MIR-219 GAUUGUC None None CM051814.1 89196526 89196585 + Gnathostomata Bilateria No 1
Ocu-Mir-219-P3 ocu-mir-219a MIR-219 GAUUGUC MIMAT0048350 MIMAT0048351 chr12 23632838 23632901 + Gnathostomata Bilateria No 1
Pab-Mir-219-P3 None MIR-219 GAUUGUC None None CM054684.2 33448778 33448840 + Gnathostomata Bilateria Yes 1
Pbv-Mir-219-P3 pbv-mir-219-1 MIR-219 GAUUGUC MIMAT0039029 None KE960054.1 25931 25986 - Gnathostomata Bilateria Unknown 1
Rno-Mir-219-P3 rno-mir-219a-1 MIR-219 GAUUGUC MIMAT0000889 MIMAT0004741 chr20 3816184 3816247 - Gnathostomata Bilateria No 1
Sha-Mir-219-P3 None MIR-219 GAUUGUC None None GL856875.1 214687 214746 - Gnathostomata Bilateria No
Spt-Mir-219-P3 None MIR-219 GAUUGUC None None QEPC01009231.1 233014 233071 - Gnathostomata Bilateria Unknown 1 1
Mun-Mir-219-P3-v1 None MIR-219 GAUUGUC None None 219-P2-v1_LR594634.1:205487529-205487662 35 101 - Gnathostomata Bilateria No 1 1
Sto-Mir-219-P3-v1 None MIR-219 GAUUGUC None None BFAA01017937.1 11339 11405 + Gnathostomata Bilateria No 1
Sto-Mir-219-P3-v2 None MIR-219 GAUUGUC None None BFAA01017937.1 11339 11405 + Gnathostomata Bilateria No 1 1
Dre-Mir-219-P3a dre-mir-219-3 MIR-219 GAUUGUC MIMAT0001286 MIMAT0031989 chr19 18861780 18861840 - Clupeocephala Bilateria No 1 1
Gmo-Mir-219-P3a gmo-mir-219-3 MIR-219 GAUUGUC None MIMAT0044313 GeneScaffold_752 202020 202079 - Clupeocephala Bilateria Unknown
Mal-Mir-219-P3a None MIR-219 GAUUGUC None None KV885154.1 139278 139343 - Clupeocephala Bilateria No 1 1
Tni-Mir-219-P3a tni-mir-219-2 MIR-219 GAUUGUC MIMAT0002901 None Un_random 16276637 16276702 + Clupeocephala Bilateria Unknown 1
Gmo-Mir-219-P3b gmo-mir-219-1 MIR-219 GAUUGUC MIMAT0044115 None GeneScaffold_1282 19894 19956 - Clupeocephala Bilateria No 1 1
Mal-Mir-219-P3b None MIR-219 GAUUGUC None None KV884920.1 559082 559145 - Clupeocephala Bilateria No 1
Tni-Mir-219-P3b None MIR-219 GAUUGUC None None 8 6475886 6475950 - Clupeocephala Bilateria Unknown 1 1
Ebu-Mir-219-P5 None MIR-219 GAUUGUC None None FYBX02010268.1 1198023 1198090 + E. burgeri Bilateria Unknown 1
Ebu-Mir-219-P6 None MIR-219 GAUUGUC None None FYBX02009657.1 6260596 6260664 + E. burgeri Bilateria Unknown 1
Efe-Mir-219-P7 None MIR-219 GAUUGUC None None Efet.01.135199 2555 2617 + E. fetida Bilateria No 1
Efe-Mir-219-P8 None MIR-219 GAUUGUC None None Efet.01.56519 3866 3931 - E. fetida Bilateria No 1
Efe-Mir-219-P9 None MIR-219 GAUUGUC None None Efet.01.125734 1344 1402 - E. fetida Bilateria No
Sme-Mir-219-P10a sme-mir-219 MIR-219 GAUUGUC MIMAT0004006 MIMAT0012118 NNSW01000123_dd_Smes_g4_123 40416 40488 + S. mediterranea Bilateria No 1
Sme-Mir-219-P10b sme-mir-219 MIR-219 GAUUGUC MIMAT0004006 MIMAT0012118 NNSW01000387_dd_Smes_g4_387 101916 101988 + S. mediterranea Bilateria No 1
Ava-Mir-219-P13 None MIR-219 GAUUGUC None None CP075492.1 5745625 5745685 - A. vaga Bilateria No 1
Ava-Mir-219-P14 None MIR-219 GAUUGUC None None CP075497.1 11168837 11168898 + A. vaga Bilateria No 1
Pdu-Mir-219-P14a None MIR-219 GAUUGUC None None JAPTHN010000006.1 22743323 22743380 + Bilateria Bilateria No 1
Pdu-Mir-219-P14b None MIR-219 GAUUGUC None None JAPTHN010000008.1 20782312 20782369 - Bilateria Bilateria No 1
Lpo-Mir-219-P20 None MIR-219 GAUUGUC None None NW_013665780.1 615506 615564 - L. polyphemus Bilateria Unknown 1 1
Lpo-Mir-219-P21 None MIR-219 GAUUGUC None None NW_013668279.1 46214 46273 + L. polyphemus Bilateria Unknown 1 1 1
Lpo-Mir-219-P22 None MIR-219 GAUUGUC None None NW_013665794.1 694873 694931 - L. polyphemus Bilateria Unknown 1 1
Lpo-Mir-219-P23 None MIR-219 GAUUGUC None None NW_013665944.1 552763 552821 + L. polyphemus Bilateria Unknown 1
Lpo-Mir-219-P24 None MIR-219 GAUUGUC None None NW_013666585.1 42578 42636 - L. polyphemus Bilateria Unknown 1 1
Cja-Mir-506-P3 None MIR-506 GAUUGUC None None CM021937.1 139219593 139219650 - Eutheria Eutheria Unknown 1 1
Dno-Mir-506-P3 dno-mir-508 MIR-506 GAUUGUC MIMAT0047954 MIMAT0047955 JH564535 697744 697800 + Eutheria Eutheria Unknown 1

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