MirGeneDB 3.0
92 microRNA genes with seed CACAGUG
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Ebu-Mir-128 None MIR-128 CACAGUG None None FYBX02009999.1 842900 842961 - Vertebrata Vertebrata Yes 1
Pma-Mir-128-o1 pma-mir-128-1 MIR-128 CACAGUG None MIMAT0019449 NC_046078.1 9991857 9991920 + P. marinus Vertebrata No 1
Pma-Mir-128-o2 pma-mir-128-2 MIR-128 CACAGUG None MIMAT0019449 NC_046070.1 11831279 11831342 - P. marinus Vertebrata No 1 1
Pma-Mir-128-o3 None MIR-128 CACAGUG None None NC_046124.1 3847691 3847753 + P. marinus Vertebrata No 1 1
Aca-Mir-128-P1 aca-mir-128-1 MIR-128 CACAGUG MIMAT0021732 MIMAT0021733 6 42720755 42720812 + Gnathostomata Vertebrata No 1 1
Ami-Mir-128-P1 ami-mir-128-2 MIR-128 CACAGUG MIMAT0038135 MIMAT0038134 NW_017708624.1 24805024 24805081 - Gnathostomata Vertebrata No 1 1 1
Bta-Mir-128-P1 bta-mir-128-2 MIR-128 CACAGUG None MIMAT0003541 NC_037349.1 9705229 9705286 + Gnathostomata Vertebrata No 1 1 1
Cfa-Mir-128-P1 cfa-mir-128-2 MIR-128 CACAGUG None MIMAT0006633 chr23 5826463 5826520 + Gnathostomata Vertebrata No 1 1 1
Cja-Mir-128-P1 None MIR-128 CACAGUG None None CM021931.1 66867244 66867302 + Gnathostomata Vertebrata No 1 1
Cli-Mir-128-P1 cli-mir-128-2 MIR-128 CACAGUG MIMAT0038502 MIMAT0038501 scaffold66 1465306 1465363 - Gnathostomata Vertebrata No 1 1
Cmi-Mir-128-P1 None MIR-128 CACAGUG None None KI635914.1 296067 296124 - Gnathostomata Vertebrata No 1 1
Cpi-Mir-128-P1 cpi-mir-128-2 MIR-128 CACAGUG MIMAT0037737 MIMAT0037736 JH584736 1559639 1559696 + Gnathostomata Vertebrata No 1 1 1
Cpo-Mir-128-P1 cpo-mir-128-2 MIR-128 CACAGUG MIMAT0046976 MIMAT0046975 scaffold_16 38623735 38623792 - Gnathostomata Vertebrata No 1 1 1
Dno-Mir-128-P1 dno-mir-128-2 MIR-128 CACAGUG MIMAT0047623 MIMAT0047622 JH570423 4138067 4138124 + Gnathostomata Vertebrata No 1 1 1
Dre-Mir-128-P1 dre-mir-128-2 MIR-128 CACAGUG None MIMAT0001824 chr19 42915449 42915507 + Gnathostomata Vertebrata No 1
Eca-Mir-128-P1 eca-mir-128-1 MIR-128 CACAGUG None MIMAT0013076 CM009163.1 50693939 50693996 - Gnathostomata Vertebrata No 1 1 1
Ete-Mir-128-P1 None MIR-128 CACAGUG None None JH980310 28263938 28263995 + Gnathostomata Vertebrata No 1 1 1
Gga-Mir-128-P1 gga-mir-128-2 MIR-128 CACAGUG MIMAT0026506 MIMAT0001123 2 45455232 45455289 + Gnathostomata Vertebrata No 1 1 1
Gja-Mir-128-P1 None MIR-128 CACAGUG None None NW_015161983.1 191480 191537 + Gnathostomata Vertebrata No 1 1
Gmo-Mir-128-P1 gmo-mir-128-3 MIR-128 CACAGUG None MIMAT0044070 scaffold05867 2159 2217 + Gnathostomata Vertebrata No 1 1
Hsa-Mir-128-P1 hsa-mir-128-2 MIR-128 CACAGUG MIMAT0031095 MIMAT0000424 chr3 35744490 35744547 + Gnathostomata Vertebrata No 1 1 1
Laf-Mir-128-P1 None MIR-128 CACAGUG None None GL010063.1 4127817 4127874 - Gnathostomata Vertebrata No 1 1
Lch-Mir-128-P1 None MIR-128 CACAGUG None None JH127771.1 308455 308512 + Gnathostomata Vertebrata Unknown 1
Loc-Mir-128-P1 None MIR-128 CACAGUG None None LG11 12608049 12608106 + Gnathostomata Vertebrata No 1
Mal-Mir-128-P1 None MIR-128 CACAGUG None None KV884770.1 1153190 1153248 + Gnathostomata Vertebrata No 1 1
Mdo-Mir-128-P1 mdo-mir-128a MIR-128 CACAGUG MIMAT0026662 MIMAT0004104 6 290241110 290241167 - Gnathostomata Vertebrata No 1 1 1
Mml-Mir-128-P1 mml-mir-128b MIR-128 CACAGUG MIMAT0026814 MIMAT0006184 CM014337.1 12009124 12009181 - Gnathostomata Vertebrata No 1 1 1
Mmr-Mir-128-P1 mmr-mir-128 MIR-128 CACAGUG None MIMAT0049219 CM007661.1 34449869 34449926 - Gnathostomata Vertebrata No 1 1 1
Mmu-Mir-128-P1 mmu-mir-128-2 MIR-128 CACAGUG MIMAT0017069 MIMAT0000140 chr9 112118644 112118701 - Gnathostomata Vertebrata No 1 1 1
Mun-Mir-128-P1 None MIR-128 CACAGUG None None 128-P1_LR594632.1:196848227-196848484 101 158 + Gnathostomata Vertebrata No 1 1 1
Neu-Mir-128-P1 None MIR-128 CACAGUG None None CM051815.1 487495723 487495780 - Gnathostomata Vertebrata No 1 1 1
Oan-Mir-128-P1 oan-mir-128-2 MIR-128 CACAGUG MIMAT0007175 MIMAT0007006 NC_041748.1 4813595 4813652 + Gnathostomata Vertebrata No 1 1 1
Ocu-Mir-128-P1 ocu-mir-128b MIR-128 CACAGUG MIMAT0048212 MIMAT0048213 chr14 22637299 22637356 + Gnathostomata Vertebrata No 1 1 1
Pab-Mir-128-P1 None MIR-128 CACAGUG None None CM068843.1 118827826 118827883 - Gnathostomata Vertebrata No 1 1 1
Pbv-Mir-128-P1 pbv-mir-128-2 MIR-128 CACAGUG None MIMAT0038921 KE953325.1 123675 123732 - Gnathostomata Vertebrata No 1 1
Rno-Mir-128-P1 rno-mir-128-2 MIR-128 CACAGUG MIMAT0017119 MIMAT0000834 chr8 120378957 120379014 - Gnathostomata Vertebrata No 1 1 1
Sha-Mir-128-P1 None MIR-128 CACAGUG None None GL841978.1 25719 25776 + Gnathostomata Vertebrata No 1 1 1
Spt-Mir-128-P1 None MIR-128 CACAGUG None None QEPC01001615.1 1026073 1026130 + Gnathostomata Vertebrata Unknown 1 1 1
Sto-Mir-128-P1 None MIR-128 CACAGUG None None BFAA01008602.1 113193 113250 - Gnathostomata Vertebrata No 1 1
Tgu-Mir-128-P1 tgu-mir-128-2 MIR-128 CACAGUG MIMAT0026977 MIMAT0014513 2 48641436 48641493 - Gnathostomata Vertebrata No 1
Tni-Mir-128-P1 tni-mir-128-2 MIR-128 CACAGUG None MIMAT0003019 21 1237210 1237268 - Gnathostomata Vertebrata No 1 1
Xtr-Mir-128-P1 xtr-mir-128-2 MIR-128 CACAGUG None MIMAT0003589 chr6 82768849 82768906 + Gnathostomata Vertebrata No 1 1
Xla-Mir-128-P1a None MIR-128 CACAGUG None None NC_030734.1 64275444 64275501 + X. laevis Vertebrata No 1 1
Xla-Mir-128-P1b None MIR-128 CACAGUG None None NC_030735.1 55536815 55536872 - X. laevis Vertebrata No 1 1
Aca-Mir-128-P2 aca-mir-128-2 MIR-128 CACAGUG None MIMAT0021733 1 96668164 96668219 + Gnathostomata Vertebrata No 1 1
Ami-Mir-128-P2 ami-mir-128-1 MIR-128 CACAGUG MIMAT0038133 MIMAT0038134 NW_017714267.1 34149786 34149841 - Gnathostomata Vertebrata No 1 1
Bta-Mir-128-P2 bta-mir-128-1 MIR-128 CACAGUG None MIMAT0003541 NC_037329.1 61675787 61675842 - Gnathostomata Vertebrata No 1 1
Cfa-Mir-128-P2 cfa-mir-128-1 MIR-128 CACAGUG None MIMAT0006633 chr19 38435956 38436011 + Gnathostomata Vertebrata No 1 1
Cja-Mir-128-P2 None MIR-128 CACAGUG None None CM021920.1 91465904 91465959 - Gnathostomata Vertebrata No 1 1
Cli-Mir-128-P2 cli-mir-128-1 MIR-128 CACAGUG None MIMAT0038501 scaffold327 1216461 1216516 + Gnathostomata Vertebrata No 1 1
Cmi-Mir-128-P2 None MIR-128 CACAGUG None None KI635899.1 2155576 2155631 + Gnathostomata Vertebrata No 1 1
Cpi-Mir-128-P2 cpi-mir-128-1 MIR-128 CACAGUG MIMAT0037735 MIMAT0037736 JH584514 82878 82933 + Gnathostomata Vertebrata No 1 1
Cpo-Mir-128-P2 cpo-mir-128-1 MIR-128 CACAGUG MIMAT0046974 MIMAT0046975 scaffold_3 51243720 51243775 - Gnathostomata Vertebrata No 1 1
Dno-Mir-128-P2 dno-mir-128-1 MIR-128 CACAGUG MIMAT0047621 MIMAT0047622 JH579355 1996922 1996977 - Gnathostomata Vertebrata No 1 1
Eca-Mir-128-P2 eca-mir-128-2 MIR-128 CACAGUG None MIMAT0013076 CM009165.1 19559615 19559670 + Gnathostomata Vertebrata No 1 1
Ete-Mir-128-P2 None MIR-128 CACAGUG None None JH980309 51796058 51796113 - Gnathostomata Vertebrata No 1 1
Gga-Mir-128-P2 gga-mir-128-1 MIR-128 CACAGUG MIMAT0031096 MIMAT0001123 7 30614336 30614391 + Gnathostomata Vertebrata No 1 1
Gja-Mir-128-P2 None MIR-128 CACAGUG None None NW_015169801.1 161044 161099 + Gnathostomata Vertebrata No 1 1
Hsa-Mir-128-P2 hsa-mir-128-1 MIR-128 CACAGUG MIMAT0026477 MIMAT0000424 chr2 135665411 135665466 + Gnathostomata Vertebrata No 1 1
Laf-Mir-128-P2 None MIR-128 CACAGUG None None GL010030.1 94543305 94543360 - Gnathostomata Vertebrata No 1 1
Lch-Mir-128-P2 None MIR-128 CACAGUG None None BAHO01265921.1 3043 3098 + Gnathostomata Vertebrata Unknown 1
Loc-Mir-128-P2 None MIR-128 CACAGUG None None LG12 3018042 3018097 - Gnathostomata Vertebrata No 1 1
Mdo-Mir-128-P2 mdo-mir-128b MIR-128 CACAGUG MIMAT0028608 MIMAT0028609 4 132653246 132653301 + Gnathostomata Vertebrata No 1 1
Mml-Mir-128-P2 mml-mir-128a MIR-128 CACAGUG MIMAT0026565 MIMAT0002229 CM014347.1 20816421 20816476 + Gnathostomata Vertebrata No 1 1
Mmr-Mir-128-P2 None MIR-128 CACAGUG None None CM007668.1 89313855 89313910 + Gnathostomata Vertebrata No 1 1
Mmu-Mir-128-P2 mmu-mir-128-1 MIR-128 CACAGUG MIMAT0016982 MIMAT0000140 chr1 128202369 128202424 + Gnathostomata Vertebrata No 1 1
Mun-Mir-128-P2 None MIR-128 CACAGUG None None 128-P2_LR594638.1:267628197-267628342 46 101 - Gnathostomata Vertebrata No 1 1
Neu-Mir-128-P2 None MIR-128 CACAGUG None None CM051817.1 298320713 298320768 - Gnathostomata Vertebrata No 1 1
Oan-Mir-128-P2 oan-mir-128-1 MIR-128 CACAGUG None MIMAT0007006 NC_041736.1 470761 470816 + Gnathostomata Vertebrata No 1 1
Ocu-Mir-128-P2 ocu-mir-128a MIR-128 CACAGUG MIMAT0048210 MIMAT0048211 chr7 72954506 72954561 + Gnathostomata Vertebrata No 1 1
Pab-Mir-128-P2 None MIR-128 CACAGUG None None CM054690.2 37938659 37938714 + Gnathostomata Vertebrata No 1 1
Pbv-Mir-128-P2 pbv-mir-128-1 MIR-128 CACAGUG MIMAT0038920 MIMAT0038921 KE956497.1 35257 35312 + Gnathostomata Vertebrata No 1 1
Rno-Mir-128-P2 rno-mir-128-1 MIR-128 CACAGUG MIMAT0017118 MIMAT0000834 chr13 44916548 44916603 + Gnathostomata Vertebrata No 1 1
Sha-Mir-128-P2 sha-mir-128 MIR-128 CACAGUG None MIMAT0022798 GL849609.1 2503941 2503996 + Gnathostomata Vertebrata No 1 1
Spt-Mir-128-P2 None MIR-128 CACAGUG None None QEPC01001524.1 6174247 6174302 + Gnathostomata Vertebrata Unknown 1 1
Sto-Mir-128-P2 None MIR-128 CACAGUG None None BFAA01002217.1 155517 155572 + Gnathostomata Vertebrata No 1 1
Tgu-Mir-128-P2 tgu-mir-128-1 MIR-128 CACAGUG MIMAT0031084 MIMAT0014513 7 31776242 31776297 + Gnathostomata Vertebrata No 1 1
Xtr-Mir-128-P2 xtr-mir-128-1 MIR-128 CACAGUG None MIMAT0003589 chr9 78757421 78757477 - Gnathostomata Vertebrata No 1 1
Dre-Mir-128-P2a dre-mir-128-1 MIR-128 CACAGUG MIMAT0031967 MIMAT0001824 chr22 12374807 12374865 + Clupeocephala Vertebrata No 1
Gmo-Mir-128-P2a gmo-mir-128-1 MIR-128 CACAGUG MIMAT0044069 MIMAT0044070 contig69349 317 375 + Clupeocephala Vertebrata No 1 1
Mal-Mir-128-P2a None MIR-128 CACAGUG None None KV884704.1 3223228 3223285 - Clupeocephala Vertebrata No 1 1
Tni-Mir-128-P2a tni-mir-128-1 MIR-128 CACAGUG None MIMAT0003019 3 4160313 4160370 - Clupeocephala Vertebrata No 1
Dre-Mir-128-P2b dre-mir-128-3 MIR-128 CACAGUG MIMAT0048666 MIMAT0001824 chrUn_KN150366v1 5637 5693 - Clupeocephala Vertebrata No 1
Gmo-Mir-128-P2b gmo-mir-128-2 MIR-128 CACAGUG MIMAT0044085 MIMAT0044070 contig99586 1799 1855 - Clupeocephala Vertebrata No 1 1
Xla-Mir-128-P2c xla-mir-128-1 MIR-128 CACAGUG MIMAT0046440 MIMAT0046439 NC_030740.1 51150867 51150923 + X. laevis Vertebrata No 1 1
Xla-Mir-128-P2d xla-mir-128-2 MIR-128 CACAGUG MIMAT0046438 MIMAT0046439 NC_030741.1 46578438 46578494 + X. laevis Vertebrata No 1 1
Cmi-Mir-128-P3 None MIR-128 CACAGUG None None AAVX02045283.1 2675 2731 + Gnathostomata Vertebrata No 1
Lch-Mir-128-P3 None MIR-128 CACAGUG None None JH127045.1 803760 803818 + Gnathostomata Vertebrata Unknown 1
Sto-Mir-128-P3 None MIR-128 CACAGUG None None BFAA01001094.1 33025 33082 - Gnathostomata Vertebrata No
Cin-Mir-3598 cin-mir-3598 MIR-3598 CACAGUG MIMAT0016399 MIMAT0016400 14 3281620 3281678 - C. intestinalis C. intestinalis No 1
Cin-Mir-4011-P2 cin-mir-4011b MIR-4011 CACAGUG MIMAT0016510 MIMAT0016511 HT000354.1 4673 4729 + C. intestinalis C. intestinalis No 1 1
Cin-Mir-4034 cin-mir-4034 MIR-4034 CACAGUG MIMAT0016557 MIMAT0016558 14 3281763 3281819 - C. intestinalis C. intestinalis No

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