MirGeneDB 3.0
63 microRNA genes with seed CCAGCAU
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Ebu-Mir-338-o1 None MIR-338 CCAGCAU None None FYBX02010512.1 3093234 3093293 + E. burgeri Vertebrata No 1 1
Ebu-Mir-338-o2 None MIR-338 CCAGCAU None None FYBX02009662.1 114366 114431 + E. burgeri Vertebrata No 1 1
Pma-Mir-338-o3 None MIR-338 CCAGCAU None None NC_046071.1 19738758 19738816 + P. marinus Vertebrata No 1
Xtr-Mir-338-P1 xtr-mir-338-2 MIR-338 CCAGCAU None MIMAT0003665 chr9 20077940 20077999 + Vertebrata Vertebrata No 1 1 1
Tni-Mir-338-P1 None MIR-338 CCAGCAU None None 2 6249043 6249104 - Vertebrata Vertebrata No 1
Tgu-Mir-338-P1 tgu-mir-338 MIR-338 CCAGCAU MIMAT0017389 MIMAT0014542 14 1435957 1436016 + Vertebrata Vertebrata No 1 1
Sto-Mir-338-P1 None MIR-338 CCAGCAU None None BFAA01002757.1 145388 145447 - Vertebrata Vertebrata No 1 1
Mun-Mir-338-P1 None MIR-338 CCAGCAU None None 338-P1_LR594639.1:26234570-26234711 42 101 - Vertebrata Vertebrata No 1 1
Mal-Mir-338-P1 None MIR-338 CCAGCAU None None KV884859.1 383307 383368 + Vertebrata Vertebrata No 1 1 1
Loc-Mir-338-P1 None MIR-338 CCAGCAU None None LG13 15505409 15505470 + Vertebrata Vertebrata No 1 1
Lch-Mir-338-P1 None MIR-338 CCAGCAU None None JH127205.1 990819 990878 - Vertebrata Vertebrata Unknown 1 1
Gmo-Mir-338-P1 gmo-mir-338-2 MIR-338 CCAGCAU MIMAT0044152 MIMAT0044153 GeneScaffold_1790 294559 294620 - Vertebrata Vertebrata No 1 1 1
Dre-Mir-338-P1 dre-mir-338-2 MIR-338 CCAGCAU None MIMAT0001873 chr12 17727559 17727620 + Vertebrata Vertebrata No 1 1 1
Cpi-Mir-338-P1 cpi-mir-338b MIR-338 CCAGCAU MIMAT0037866 MIMAT0037867 JH584772 1374338 1374397 - Vertebrata Vertebrata No 1 1
Cmi-Mir-338-P1 None MIR-338 CCAGCAU None None KI635884.1 1248653 1248712 - Vertebrata Vertebrata No 1 1
Cli-Mir-338-P1 cli-mir-338a MIR-338 CCAGCAU MIMAT0038618 MIMAT0038619 scaffold1084 334966 335025 + Vertebrata Vertebrata No 1 1
Ami-Mir-338-P1 ami-mir-338-2 MIR-338 CCAGCAU MIMAT0038270 MIMAT0038269 NW_017711568.1 12303543 12303602 + Vertebrata Vertebrata No 1 1
Xla-Mir-338-P1a None MIR-338 CCAGCAU None None NC_030740.1 99893009 99893068 - X. laevis Vertebrata No 1 1 1
Xla-Mir-338-P1b xla-mir-338 MIR-338 CCAGCAU MIMAT0046578 MIMAT0046579 NC_030741.1 89723910 89723969 - X. laevis Vertebrata No 1 1 1
Xtr-Mir-338-P2 xtr-mir-338-1 MIR-338 CCAGCAU None MIMAT0003665 chr10 18675794 18675854 + Vertebrata Vertebrata No 1
Tgu-Mir-338-P2 None MIR-338 ACAAUAU None None 18 1498115 1498175 + Vertebrata Vertebrata No 1 1
Sto-Mir-338-P2 None MIR-338 CCAGCAU None None BFAA01011895.1 45596 45655 + Vertebrata Vertebrata No 1 1
Spt-Mir-338-P2 None MIR-338 CCAGCAU None None QEPC01011341.1 17583536 17583596 - Vertebrata Vertebrata Unknown 1 1
Sha-Mir-338-P2 sha-mir-338 MIR-338 CCAGCAU None MIMAT0022818 GL856847.1 53467 53527 + Vertebrata Vertebrata No 1 1
Rno-Mir-338-P2 rno-mir-338 MIR-338 CCAGCAU MIMAT0004646 MIMAT0000581 chr10 109195254 109195311 - Vertebrata Vertebrata No 1
Pbv-Mir-338-P2 pbv-mir-338 MIR-338 CCAGCAU MIMAT0039041 MIMAT0039042 KE952972.1 1131002 1131062 + Vertebrata Vertebrata No 1 1
Pab-Mir-338-P2 None MIR-338 CCAGCAU None None CM054698.2 96593343 96593401 - Vertebrata Vertebrata No 1
Ocu-Mir-338-P2 None MIR-338 CCAGCAU None None Ocu-Mir-338-P1_pre_CM023790.1:63182364-63182505 42 101 - Vertebrata Vertebrata No 1
Oan-Mir-338-P2 None MIR-338 CCAGCAU None None NW_021638079.1 3139464 3139523 - Vertebrata Vertebrata No 1
Neu-Mir-338-P2 None MIR-338 CCAGCAU None None CM051814.1 324355077 324355137 - Vertebrata Vertebrata No 1 1
Mmu-Mir-338-P2 mmu-mir-338 MIR-338 CCAGCAU MIMAT0004647 MIMAT0000582 chr11 120014780 120014837 - Vertebrata Vertebrata No 1
Mml-Mir-338-P2 mml-mir-338 MIR-338 CCAGCAU MIMAT0006277 MIMAT0006278 CM014351.1 77460701 77460759 - Vertebrata Vertebrata No 1
Mdo-Mir-338-P2 mdo-mir-338 MIR-338 CCAGCAU None MIMAT0004136 2 233883752 233883812 + Vertebrata Vertebrata No 1 1
Loc-Mir-338-P2 None MIR-338 CCAGCAU None None LG10 37463978 37464038 - Vertebrata Vertebrata No 1 1
Lch-Mir-338-P2 None MIR-338 CCAGCAU None None JH126581.1 1083401 1083462 + Vertebrata Vertebrata Unknown 1 1
Laf-Mir-338-P2 None MIR-338 CCAGCAU None None GL010076.1 1770981 1771038 + Vertebrata Vertebrata No 1
Hsa-Mir-338-P2 hsa-mir-338 MIR-338 CCAGCAU MIMAT0004701 MIMAT0000763 chr17 81125886 81125944 - Vertebrata Vertebrata No 1
Gja-Mir-338-P2 None MIR-338 CCAGCAU None None NW_015160208.1 1494395 1494455 + Vertebrata Vertebrata No 1 1
Gga-Mir-338-P2 gga-mir-338 MIR-338 CCAGCAU MIMAT0037551 MIMAT0037552 18 9290670 9290730 + Vertebrata Vertebrata No 1 1
Ete-Mir-338-P2 None MIR-338 CCAGCAU None None manual_Ete-Mir-338-P1 34 91 + Vertebrata Vertebrata No 1
Eca-Mir-338-P2 eca-mir-338 MIR-338 CCAGCAU MIMAT0013035 MIMAT0013036 CM009158.1 1969261 1969319 + Vertebrata Vertebrata No 1
Dno-Mir-338-P2 dno-mir-338 MIR-338 CCAGCAU MIMAT0047819 MIMAT0047820 JH565942 225934 225994 + Vertebrata Vertebrata No 1 1
Cpo-Mir-338-P2 cpo-mir-338 MIR-338 CCAGCAU MIMAT0047174 MIMAT0047175 scaffold_76 5706537 5706595 - Vertebrata Vertebrata No 1
Cpi-Mir-338-P2 cpi-mir-338a MIR-338 ACAAUAU MIMAT0037864 MIMAT0037865 JH584464 13339455 13339515 + Vertebrata Vertebrata No 1
Cmi-Mir-338-P2 None MIR-338 CCAGCAU None None KI635864.1 8237603 8237662 - Vertebrata Vertebrata No 1 1
Cli-Mir-338-P2 cli-mir-338b MIR-338 CCAGCAU MIMAT0038620 MIMAT0038621 scaffold331 82791 82851 + Vertebrata Vertebrata No 1 1
Cja-Mir-338-P2 None MIR-338 CCAGCAU None None CM021919.1 132897635 132897693 - Vertebrata Vertebrata No 1
Cfa-Mir-338-P2 cfa-mir-338 MIR-338 CCAGCAU None MIMAT0006739 chr9 918652 918710 + Vertebrata Vertebrata No 1
Bta-Mir-338-P2 bta-mir-338 MIR-338 CCAGCAU None MIMAT0009292 NC_037346.1 51569635 51569693 + Vertebrata Vertebrata No 1
Ami-Mir-338-P2 ami-mir-338-1 MIR-338 CCAGCAU MIMAT0038268 MIMAT0038269 NW_017708635.1 14518 14578 - Vertebrata Vertebrata No 1
Aca-Mir-338-P2 aca-mir-338 MIR-338 CCAGCAU MIMAT0021937 MIMAT0021938 2 99499976 99500036 + Vertebrata Vertebrata No 1 1
Tni-Mir-338-P2a tni-mir-338 MIR-338 CCAGCAU None MIMAT0003008 3 10941080 10941140 + Clupeocephala Vertebrata No 1
Mal-Mir-338-P2a None MIR-338 CCAGCAU None None KV885038.1 28318 28378 + Clupeocephala Vertebrata No 1
Gmo-Mir-338-P2a gmo-mir-338-1 MIR-338 CCAGCAU MIMAT0044177 MIMAT0044153 GeneScaffold_2140 179542 179603 - Clupeocephala Vertebrata No 1 1
Dre-Mir-338-P2a dre-mir-338-3 MIR-338 CCAGCAU MIMAT0048672 MIMAT0048673 chr3 51907489 51907549 - Clupeocephala Vertebrata No 1
Tni-Mir-338-P2b None MIR-338 CCAGCAU None None 2 2385304 2385364 + Clupeocephala Vertebrata No 1 1
Mal-Mir-338-P2b None MIR-338 CCAGCAU None None KV884755.1 1797539 1797599 + Clupeocephala Vertebrata No 1
Gmo-Mir-338-P2b gmo-mir-338-3 MIR-338 CCAGCAU MIMAT0044309 MIMAT0044153 GeneScaffold_640 8792 8852 - Clupeocephala Vertebrata No 1 1
Dre-Mir-338-P2b dre-mir-338-1 MIR-338 CCAGCAU None MIMAT0001873 chr12 35710532 35710592 - Clupeocephala Vertebrata No 1
Xla-Mir-338-P2c None MIR-338 ACAAUAU None None NC_030740.1 22348510 22348570 + X. laevis Vertebrata No 1
Xla-Mir-338-P2d None MIR-338 ACAAUAU None None NC_030741.1 22008109 22008169 - X. laevis Vertebrata No 1
Mun-Mir-338-P2e None MIR-338 CCAGCAU None None 338-P2c_LR594637.1:340963719-340963979 101 161 + M. unicolor Vertebrata No 1 1
Mun-Mir-338-P2f None MIR-338 CCAGCAU None None 338-P2d_LR594637.1:341054640-341054900 101 161 + M. unicolor Vertebrata No 1 1

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