MirGeneDB 2.1
MirGeneDB ID

Csc-Mir-29-P2

Family name MIR-29 (all species)
Seed AGCACCA
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues
Orthologues Aae-Mir-29-P2h  Aca-Mir-29-P2b  Aca-Mir-29-P2d  Ami-Mir-29-P2b  Ami-Mir-29-P2d  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bge-Mir-29-P2g  Bge-Mir-29-P2h  Bla-Mir-29-P2  Bta-Mir-29-P2b  Bta-Mir-29-P2d1  Bta-Mir-29-P2d2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cfa-Mir-29-P2b  Cfa-Mir-29-P2d7  Cfa-Mir-29-P2d8  Cgi-Mir-29-P2  Cin-Mir-29-P2  Cli-Mir-29-P2b  Cli-Mir-29-P2d  Cmi-Mir-29-P2a-v1  Cmi-Mir-29-P2a-v2  Cmi-Mir-29-P2b  Cmi-Mir-29-P2d  Cpi-Mir-29-P2b  Cpi-Mir-29-P2d  Cpo-Mir-29-P2b  Cpo-Mir-29-P2d  Cte-Mir-29-P2  Dan-Mir-29-P2g  Dan-Mir-29-P2h  Dma-Mir-29-P2g  Dma-Mir-29-P2h  Dme-Mir-29-P2g  Dme-Mir-29-P2h  Dmo-Mir-29-P2g  Dmo-Mir-29-P2h  Dno-Mir-29-P2b  Dno-Mir-29-P2d  Dpu-Mir-29-P2g  Dpu-Mir-29-P2h  Dre-Mir-29-P2b1  Dre-Mir-29-P2d2  Dsi-Mir-29-P2g  Dsi-Mir-29-P2h  Dya-Mir-29-P2g  Dya-Mir-29-P2h  Ebu-Mir-29-P2e  Ebu-Mir-29-P2f  Efe-Mir-29-P2k  Efe-Mir-29-P2l  Esc-Mir-29-P2  Ete-Mir-29-P2b  Ete-Mir-29-P2d  Gga-Mir-29-P2b  Gga-Mir-29-P2d  Gja-Mir-29-P2b  Gja-Mir-29-P2d  Gmo-Mir-29-P2b1  Gmo-Mir-29-P2d1  Gmo-Mir-29-P2d2  Hme-Mir-29-P2h  Hsa-Mir-29-P2b  Hsa-Mir-29-P2d  Isc-Mir-29-P2  Lan-Mir-29-P2i  Lan-Mir-29-P2j  Lch-Mir-29-P2a  Lch-Mir-29-P2b  Lch-Mir-29-P2d  Lgi-Mir-29-P2  Loc-Mir-29-P2a  Loc-Mir-29-P2b  Loc-Mir-29-P2d-v1  Loc-Mir-29-P2d-v2  Lpo-Mir-29-P2m  Lpo-Mir-29-P2n  Mal-Mir-29-P2b1-v1  Mal-Mir-29-P2b1-v2  Mal-Mir-29-P2d1  Mal-Mir-29-P2d2  Mdo-Mir-29-P2b  Mdo-Mir-29-P2d  Mml-Mir-29-P2b  Mml-Mir-29-P2d  Mmu-Mir-29-P2b  Mmu-Mir-29-P2d  Mun-Mir-29-P2b  Mun-Mir-29-P2d  Npo-Mir-29-P2  Oan-Mir-29-P2b  Oan-Mir-29-P2d  Obi-Mir-29-P2  Ocu-Mir-29-P2b  Ocu-Mir-29-P2d  Ovu-Mir-29-P2  Pbv-Mir-29-P2b  Pbv-Mir-29-P2d  Pfl-Mir-29-P2  Pma-Mir-29-P2o1  Pma-Mir-29-P2o2  Pmi-Mir-29-P2  Rno-Mir-29-P2b  Rno-Mir-29-P2d5  Rno-Mir-29-P2d6  Sha-Mir-29-P2b  Sha-Mir-29-P2d  Sko-Mir-29-P2  Spt-Mir-29-P2b  Spt-Mir-29-P2d  Spu-Mir-29-P2  Sto-Mir-29-P2b  Sto-Mir-29-P2d  Tca-Mir-29-P2g  Tca-Mir-29-P2h  Tgu-Mir-29-P2b  Tgu-Mir-29-P2d  Tni-Mir-29-P2b1  Tni-Mir-29-P2d1  Tni-Mir-29-P2d2  Xbo-Mir-29-P2  Xla-Mir-29-P2b3  Xla-Mir-29-P2b4  Xla-Mir-29-P2d3  Xla-Mir-29-P2d4  Xtr-Mir-29-P2b  Xtr-Mir-29-P2d 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)		 NW_019385575.1: 8841-8900 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUCUACGAAUUUCGUUUGUCCUUGGGUUACUGGUUUCAUUUGGUGGUUAGAUGUGUUUCGUUACUCUAGCACCAUUUGAAUUCAGUUCAUCCAAGGGAGGUGAUACCGGCGAUGGACG
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Structure
        10        20         30         40        50          
UUGUCUACGAAUUUCGUUUG-         U-|   GU    UU     G     UGUGUU 
                     UCCUUGGGU  ACUG  UUCA  UGGUG UUAGA      \
                     GGGAACCUA  UGAC  AAGU  ACCAC GAUCU      U
GCAGGUAGCGGCCAUAGUGGA         CU^   UU    UU     -     CAUUGC 
.       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-29-P2_5p*
mirBase accessionNone
Sequence 
0- ACUGGUUUCAUUUGGUGGUUAGA -23
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Mature sequence

Csc-Mir-29-P2_3p
mirBase accessionNone
Sequence 
38- UAGCACCAUUUGAAUUCAGUUC -60
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