Mir
Gene
DB
2.1
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83 microRNA genes with seed UCCCUUU
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
▼
CNNC
Ebu-Mir-204
None
MIR-204
UCCCUUU
None
None
FYBX02010610.1
177929
177986
-
Vertebrata
Vertebrata
No
1
Pma-Mir-204
pma-mir-204
MIR-204
UCCCUUU
MIMAT0019515
MIMAT0019516
NC_046125.1
4465635
4465692
+
Vertebrata
Vertebrata
No
1
1
Tgu-Mir-204-P1
tgu-mir-204-2
MIR-204
UCCCUUU
MIMAT0014570
None
10
6213146
6213203
+
Gnathostomata
Vertebrata
Unknown
1
1
Sto-Mir-204-P1
None
MIR-204
UCCCUUU
None
None
BFAA01322934.1
406
463
+
Gnathostomata
Vertebrata
Unknown
1
1
Hsa-Mir-204-P1
hsa-mir-211
MIR-204
UCCCUUU
MIMAT0000268
MIMAT0022694
chr15
31065059
31065116
-
Gnathostomata
Vertebrata
No
1
1
Ami-Mir-204-P1
ami-mir-204-2
MIR-204
UCCCUUU
MIMAT0038225
MIMAT0038227
NW_017713709.1
32217618
32217675
+
Gnathostomata
Vertebrata
No
1
1
Cmi-Mir-204-P1
None
MIR-204
UCCCUUU
None
None
KI635859.1
11321625
11321682
+
Gnathostomata
Vertebrata
Unknown
1
1
Mml-Mir-204-P1
mml-mir-211
MIR-204
UCCCUUU
MIMAT0002547
None
chr7
6944860
6944917
-
Gnathostomata
Vertebrata
No
1
1
Cpi-Mir-204-P1
cpi-mir-204-2
MIR-204
UCCCUUU
MIMAT0037827
None
JH584488
3935478
3935535
-
Gnathostomata
Vertebrata
No
1
1
Mmu-Mir-204-P1
mmu-mir-211
MIR-204
UCCCUUU
MIMAT0000668
MIMAT0017059
chr7
64205831
64205888
+
Gnathostomata
Vertebrata
No
1
1
Aca-Mir-204-P1
aca-mir-204a-1
MIR-204
UCCCUUU
MIMAT0021853
None
GL343428.1
107556
107613
-
Gnathostomata
Vertebrata
No
1
Rno-Mir-204-P1
rno-mir-211
MIR-204
UCCCUUU
MIMAT0000882
MIMAT0017157
chr1
125042144
125042201
+
Gnathostomata
Vertebrata
No
1
1
Pbv-Mir-204-P1
pbv-mir-204-2
MIR-204
UCCCUUU
MIMAT0039006
None
KE960308.1
31446
31503
-
Gnathostomata
Vertebrata
Unknown
Cpo-Mir-204-P1
cpo-mir-211
MIR-204
UCCCUUU
MIMAT0047111
MIMAT0047112
scaffold_10
48990198
48990254
-
Gnathostomata
Vertebrata
No
1
Gja-Mir-204-P1
None
MIR-204
UCCCUUU
None
None
NW_015171524.1
6148
6205
+
Gnathostomata
Vertebrata
Unknown
1
Ocu-Mir-204-P1
ocu-mir-211
MIR-204
UCCCUUU
MIMAT0048333
MIMAT0048334
chr17
83064318
83064375
+
Gnathostomata
Vertebrata
No
1
1
Spt-Mir-204-P1
None
MIR-204
UCCCUUU
None
None
QEPC01009267.1
1579709
1579766
+
Gnathostomata
Vertebrata
Unknown
1
1
Cfa-Mir-204-P1
cfa-mir-211
MIR-204
UCCCUUU
MIMAT0009867
None
chr3
37882681
37882738
+
Gnathostomata
Vertebrata
Unknown
1
1
Bta-Mir-204-P1
bta-mir-211
MIR-204
UCCCUUU
MIMAT0009263
None
NC_037348.1
27536525
27536582
-
Gnathostomata
Vertebrata
No
1
1
Xtr-Mir-204-P1
xtr-mir-204-1
MIR-204
UCCCUUU
MIMAT0003696
None
chr3
87225673
87225730
+
Gnathostomata
Vertebrata
No
1
1
Dno-Mir-204-P1
dno-mir-211
MIR-204
UCCCUUU
MIMAT0047756
MIMAT0047757
JH582005
579275
579331
-
Gnathostomata
Vertebrata
Unknown
1
1
Mun-Mir-204-P1
None
MIR-204
UCCCUUU
None
None
204-P1_LR594632.1:696390164-696390421
101
158
+
Gnathostomata
Vertebrata
Unknown
1
Lch-Mir-204-P1
None
MIR-204
UCCCUUU
None
None
JH126577.1
3208970
3209027
+
Gnathostomata
Vertebrata
Unknown
1
1
Sha-Mir-204-P1
None
MIR-204
UCCCUUU
None
None
GL834482.1
2449273
2449330
-
Gnathostomata
Vertebrata
No
1
Mdo-Mir-204-P1
mdo-mir-204
MIR-204
UCCCUUU
MIMAT0004127
None
1
142496661
142496718
-
Gnathostomata
Vertebrata
No
1
1
Oan-Mir-204-P1
oan-mir-204
MIR-204
UCCCUUU
MIMAT0006841
MIMAT0006842
NC_041732.1
54081453
54081510
+
Gnathostomata
Vertebrata
No
1
1
Gga-Mir-204-P1
gga-mir-204-2
MIR-204
UCCCUUU
MIMAT0001156
None
10
6140988
6141045
+
Gnathostomata
Vertebrata
No
1
1
Cli-Mir-204-P1
cli-mir-204-2
MIR-204
UCCCUUU
MIMAT0038580
MIMAT0038582
scaffold506
653116
653173
+
Gnathostomata
Vertebrata
No
1
1
Loc-Mir-204-P1
None
MIR-204
UCCCUUU
None
None
LG3
53892358
53892415
+
Gnathostomata
Vertebrata
Unknown
1
1
Xla-Mir-204-P1d
None
MIR-204
UCCCUUU
None
None
NC_030729.1
55545431
55545488
-
X. laevis
Vertebrata
No
1
1
Tgu-Mir-204-P2
tgu-mir-204-1
MIR-204
UCCCUUU
MIMAT0014570
None
Z
12463928
12463987
-
Gnathostomata
Vertebrata
No
1
1
Sto-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
BFAA01000604.1
438648
438706
-
Gnathostomata
Vertebrata
No
1
1
Hsa-Mir-204-P2
hsa-mir-204
MIR-204
UCCCUUU
MIMAT0000265
MIMAT0022693
chr9
70809993
70810052
-
Gnathostomata
Vertebrata
No
1
1
Ami-Mir-204-P2
ami-mir-204-1
MIR-204
UCCCUUU
MIMAT0038225
MIMAT0038226
NW_017713772.1
27629970
27630029
+
Gnathostomata
Vertebrata
No
1
1
Cmi-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
KI636021.1
267272
267331
-
Gnathostomata
Vertebrata
Unknown
1
Mml-Mir-204-P2
mml-mir-204
MIR-204
UCCCUUU
MIMAT0006235
MIMAT0026843
chr15
86992615
86992674
-
Gnathostomata
Vertebrata
No
1
1
Cpi-Mir-204-P2
cpi-mir-204-1
MIR-204
UCCCUUU
MIMAT0037827
MIMAT0037828
JH584686
8931176
8931235
+
Gnathostomata
Vertebrata
No
1
1
Mmu-Mir-204-P2
mmu-mir-204
MIR-204
UCCCUUU
MIMAT0000237
MIMAT0017002
chr19
22750610
22750669
+
Gnathostomata
Vertebrata
No
1
1
Aca-Mir-204-P2
aca-mir-204a-2
MIR-204
UCCCUUU
MIMAT0021853
MIMAT0021854
2
48871989
48872048
+
Gnathostomata
Vertebrata
No
1
1
Rno-Mir-204-P2
rno-mir-204
MIR-204
UCCCUUU
MIMAT0000877
MIMAT0004739
chr1
240403032
240403091
+
Gnathostomata
Vertebrata
No
1
1
Pbv-Mir-204-P2
pbv-mir-204-1
MIR-204
UCCCUUU
MIMAT0039006
MIMAT0039007
KE955677.1
99338
99397
+
Gnathostomata
Vertebrata
Unknown
1
1
Cpo-Mir-204-P2
cpo-mir-204
MIR-204
UCCCUUU
MIMAT0047099
MIMAT0047100
scaffold_21
21988247
21988306
-
Gnathostomata
Vertebrata
No
1
1
Gja-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
NW_015176022.1
16453
16512
-
Gnathostomata
Vertebrata
No
1
1
Ocu-Mir-204-P2
ocu-mir-204
MIR-204
UCCCUUU
MIMAT0048323
MIMAT0048324
chr1
57081764
57081823
-
Gnathostomata
Vertebrata
No
1
1
Spt-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
QEPC01009656.1
3655356
3655415
-
Gnathostomata
Vertebrata
Unknown
1
1
Cfa-Mir-204-P2
cfa-mir-204
MIR-204
UCCCUUU
MIMAT0006598
None
chr1
86818494
86818553
+
Gnathostomata
Vertebrata
No
1
1
Bta-Mir-204-P2
bta-mir-204
MIR-204
UCCCUUU
MIMAT0004338
None
NC_037335.1
46962522
46962581
-
Gnathostomata
Vertebrata
No
1
1
Xtr-Mir-204-P2
xtr-mir-204-2
MIR-204
UCCCUUU
MIMAT0003696
None
chr1
117768519
117768578
-
Gnathostomata
Vertebrata
No
1
1
Dno-Mir-204-P2
dno-mir-204
MIR-204
UCCCUUU
MIMAT0047744
MIMAT0047745
JH566042
700050
700109
+
Gnathostomata
Vertebrata
No
1
1
Mun-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
204-P2_LR594633.1:243787357-243787498
42
101
-
Gnathostomata
Vertebrata
Unknown
1
1
Ete-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
JH980371
981677
981736
-
Gnathostomata
Vertebrata
No
1
1
Lch-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
JH127310.1
529915
529974
-
Gnathostomata
Vertebrata
Unknown
1
1
Sha-Mir-204-P2
sha-mir-204
MIR-204
UCCCUUU
None
MIMAT0022790
GL841514.1
388110
388169
+
Gnathostomata
Vertebrata
No
1
1
Tni-Mir-204-P2
tni-mir-204b
MIR-204
UCCCUUU
MIMAT0002935
None
12
981062
981119
+
Gnathostomata
Vertebrata
Unknown
1
1
Mdo-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
6
95848849
95848908
+
Gnathostomata
Vertebrata
No
1
1
Gmo-Mir-204-P2
gmo-mir-204-3
MIR-204
UCCCUUU
MIMAT0044029
None
contig320882
1384
1443
+
Gnathostomata
Vertebrata
Unknown
1
1
Oan-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
NC_041753.1
57858118
57858177
-
Gnathostomata
Vertebrata
No
1
1
Mal-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
KV884711.1
502331
502390
+
Gnathostomata
Vertebrata
No
1
1
Gga-Mir-204-P2
gga-mir-204-1
MIR-204
UCCCUUU
MIMAT0001156
None
Z
35192633
35192692
-
Gnathostomata
Vertebrata
No
1
1
Dre-Mir-204-P2
dre-mir-204-1
MIR-204
UCCCUUU
MIMAT0001279
MIMAT0031924
chr5
25972085
25972142
+
Gnathostomata
Vertebrata
No
1
1
Cli-Mir-204-P2
cli-mir-204-1
MIR-204
UCCCUUU
MIMAT0038580
MIMAT0038581
scaffold148
920658
920717
+
Gnathostomata
Vertebrata
No
1
1
Loc-Mir-204-P2
None
MIR-204
UCCCUUU
None
None
LG2
33545292
33545351
-
Gnathostomata
Vertebrata
No
1
1
Tgu-Mir-204-P4
tgu-mir-204-3
MIR-204
UCCCUUU
MIMAT0014570
None
28
4412657
4412714
+
Gnathostomata
Vertebrata
Unknown
1
1
Sto-Mir-204-P4
None
MIR-204
UCCCUUU
None
None
BFAA01002899.1
48427
48482
-
Gnathostomata
Vertebrata
Unknown
1
1
Ami-Mir-204-P4
None
MIR-204
UCCCUUU
None
None
NW_017710448.1
1273114
1273171
-
Gnathostomata
Vertebrata
No
1
Cmi-Mir-204-P4
None
MIR-204
UCCCUUU
None
None
KI636146.1
13447
13505
-
Gnathostomata
Vertebrata
No
1
1
Cpi-Mir-204-P4
cpi-mir-204-3
MIR-204
UCCCUUU
MIMAT0037827
MIMAT0037829
JH584473
3350477
3350534
-
Gnathostomata
Vertebrata
No
1
1
Pbv-Mir-204-P4
pbv-mir-204-3
MIR-204
UCCCUUU
MIMAT0039006
MIMAT0039008
KE956236.1
133468
133526
-
Gnathostomata
Vertebrata
No
1
Gja-Mir-204-P4
None
MIR-204
UCCCUUU
None
None
NW_015170928.1
396203
396260
+
Gnathostomata
Vertebrata
No
1
Spt-Mir-204-P4
None
MIR-204
UCCCUUU
None
None
QEPC01004913.1
2027000
2027057
-
Gnathostomata
Vertebrata
Unknown
1
Mun-Mir-204-P4
None
MIR-204
UCCCUUU
None
None
204-P3_LR594642.1:78508452-78508709
101
158
+
Gnathostomata
Vertebrata
Unknown
1
1
Lch-Mir-204-P4
None
MIR-204
UCCCUUU
None
None
JH126742.1
936419
936476
+
Gnathostomata
Vertebrata
Unknown
1
Gga-Mir-204-P4
gga-mir-211
MIR-204
UCCCUUU
MIMAT0003368
None
28
2326325
2326382
+
Gnathostomata
Vertebrata
No
Cli-Mir-204-P4
cli-mir-204-3
MIR-204
UCCCUUU
MIMAT0038580
MIMAT0038583
scaffold194
1274466
1274522
+
Gnathostomata
Vertebrata
No
1
1
Gmo-Mir-204-P1a
gmo-mir-204-1
MIR-204
UCCCUUU
MIMAT0044029
None
GeneScaffold_530
6574
6631
+
Clupeocephala
Vertebrata
No
1
1
Dre-Mir-204-P1a
dre-mir-204-2
MIR-204
UCCCUUU
MIMAT0001279
MIMAT0031987
chr7
29337026
29337083
-
Clupeocephala
Vertebrata
No
1
Xla-Mir-204-P2a
None
MIR-204
UCCCUUU
None
None
NC_030724.1
128264538
128264597
-
X. laevis
Vertebrata
No
1
1
Tni-Mir-204-P1b
tni-mir-204a
MIR-204
UCCCUUU
MIMAT0003102
None
13
7729309
7729365
+
Clupeocephala
Vertebrata
No
1
1
Gmo-Mir-204-P1b
gmo-mir-204-2
MIR-204
UCCCUUU
MIMAT0044029
None
GeneScaffold_2132
114227
114284
-
Clupeocephala
Vertebrata
No
1
1
Mal-Mir-204-P1b
None
MIR-204
UCCCUUU
None
None
KV884906.1
917162
917218
-
Clupeocephala
Vertebrata
No
1
1
Dre-Mir-204-P1b
dre-mir-204-3
MIR-204
UCCCUUU
MIMAT0001279
MIMAT0048659
chr25
34590805
34590862
+
Clupeocephala
Vertebrata
No
1
1
Xla-Mir-204-P2b
None
MIR-204
UCCCUUU
None
None
NC_030725.1
105328821
105328880
-
X. laevis
Vertebrata
No
1
1
Xla-Mir-204-P1c
None
MIR-204
UCCCUUU
None
None
NC_030728.1
87040550
87040607
+
X. laevis
Vertebrata
No
1
1
Download sequences for:
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