Mir
Gene
DB
3.0
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Information
228 microRNA genes of family MIR-1
Sort by genome coordinates
Motifs
MirGeneDB ID
▼
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Xbo-Mir-1
None
MIR-1
GGAAUGU
None
None
scaffold10079
30859
30918
-
Bilateria
Bilateria
No
1
1
War-Mir-1
None
MIR-1
GGAAUGU
None
None
WNLI01166004.1
485
543
+
Bilateria
Bilateria
No
1
Tur-Mir-1
tur-mir-1
MIR-1
GGAAUGU
MIMAT0023094
MIMAT0023095
HE587326.1
697265
697325
+
Bilateria
Bilateria
No
1
Tca-Mir-1
tca-mir-1
MIR-1
GGAAUGU
MIMAT0019092
MIMAT0008352
LG5
10584667
10584724
-
Bilateria
Bilateria
No
1
Sro-Mir-1
None
MIR-1
GGAAUGU
None
None
JANVAR010000106.1
320426
320494
+
Bilateria
Bilateria
No
Spu-Mir-1
spu-mir-1
MIR-1
GGAAUGU
None
MIMAT0009650
AAGJ06000013.1
7279918
7279981
+
Bilateria
Bilateria
No
1
Snu-Mir-1
None
MIR-1
GGAAUGU
None
None
CM049309.1
9330723
9330784
+
Bilateria
Bilateria
No
1
Sne-Mir-1
None
MIR-1
GGAAUGU
None
None
k141_2204
23493
23663
-
Bilateria
Bilateria
No
1
Sma-Mir-1
sma-mir-1b
MIR-1
GGAAUGU
MIMAT0033641
MIMAT0033642
OU426850.1
17242666
17242777
+
Bilateria
Bilateria
No
1
Sko-Mir-1
sko-mir-1
MIR-1
GGAAUGU
MIMAT0019152
MIMAT0009607
NW_003119931.1
111783
111844
-
Bilateria
Bilateria
No
Rph-Mir-1
None
MIR-1
GGAAUGU
None
None
CM018526.1
16504069
16504136
-
Bilateria
Bilateria
No
1
Pmi-Mir-1
pmi-mir-1
MIR-1
GGAAUGU
None
MIMAT0032140
JH783195.1
13179
13242
+
Bilateria
Bilateria
No
1
Ple-Mir-1
None
MIR-1
GGAAUGU
None
None
WNNJ02001172.1
65479
65535
+
Bilateria
Bilateria
No
Pfl-Mir-1
None
MIR-1
GGAAUGU
None
None
LD345073.1
123485
123547
+
Bilateria
Bilateria
No
Pdu-Mir-1
None
MIR-1
GGAAUGU
None
None
JAPTHN010000001.1
162427565
162427622
+
Bilateria
Bilateria
No
1
Pcr-Mir-1
None
MIR-1
GGAAUGU
None
None
CAJQUW010008152.1
188789
188861
+
Bilateria
Bilateria
No
1
Pca-Mir-1
None
MIR-1
GGAAUGU
None
None
KQ714965.1
444432
444491
+
Bilateria
Bilateria
No
1
1
1
Pau-Mir-1
None
MIR-1
GGAAUGU
None
None
NMRA01000435.1
97272
97330
+
Bilateria
Bilateria
No
1
Ovu-Mir-1
None
MIR-1
GGAAUGU
None
None
RXHP01060689.1
731349
731408
-
Bilateria
Bilateria
No
1
Ofu-Mir-1
None
MIR-1
GGAAUGU
None
None
CAIIXF020000001.1
12267922
12267980
-
Bilateria
Bilateria
No
1
Obi-Mir-1
None
MIR-1
GGAAUGU
None
None
KQ427059
741109
741168
-
Bilateria
Bilateria
No
1
Mom-Mir-1
None
MIR-1
GGAAUGU
None
None
JARFOD010000033.1
268371
268430
+
Bilateria
Bilateria
No
1
Mgi-Mir-1
None
MIR-1
GGAAUGU
None
None
scaffold1174
365483
365546
+
Bilateria
Bilateria
No
1
1
Llo-Mir-1
None
MIR-1
GGAAUGU
None
None
OU342995.1
23646540
23646597
+
Bilateria
Bilateria
No
1
Lhy-Mir-1
None
MIR-1
GGAAUGU
None
None
scaffold212496_32.0
1554
1615
-
Bilateria
Bilateria
No
1
Lgi-Mir-1
lgi-mir-1
MIR-1
GGAAUGU
None
MIMAT0009557
LOTGIsca_1
5198467
5198526
-
Bilateria
Bilateria
No
1
Lan-Mir-1
None
MIR-1
GGAAUGU
None
None
LFEI01000115
322434
322493
+
Bilateria
Bilateria
No
1
Isc-Mir-1
isc-mir-1
MIR-1
GGAAUGU
None
MIMAT0012681
NW_024609883.1
32135819
32135882
+
Bilateria
Bilateria
No
1
1
Hru-Mir-1
None
MIR-1
GGAAUGU
None
None
JALGQA010000002.1
71361077
71361137
+
Bilateria
Bilateria
No
1
1
Hmi-Mir-1
None
MIR-1
GGAAUGU
None
None
SCFE01000361.1
86125
86178
+
Bilateria
Bilateria
No
Hme-Mir-1
hme-mir-1a
MIR-1
GGAAUGU
None
MIMAT0024946
HE672073
1166274
1166332
-
Bilateria
Bilateria
No
Gsp-Mir-1
None
MIR-1
GGAAUGU
None
None
OX940786.1
35294815
35294880
+
Bilateria
Bilateria
No
Gsa-Mir-1
gsa-mir-1
MIR-1
GGAAUGU
MIMAT0035240
MIMAT0035241
scf7180006947477
9299
9394
+
Bilateria
Bilateria
No
1
Gpa-Mir-1
None
MIR-1
GGAAUGU
None
None
Scaffold39
433990
434050
+
Bilateria
Bilateria
No
1
Esc-Mir-1
None
MIR-1
GGAAUGU
None
None
Esc-Mir-1_pre_SRIE01021419.1:633880-634021
42
101
-
Bilateria
Bilateria
No
1
Egr-Mir-1
egr-mir-1
MIR-1
GGAAUGU
MIMAT0020228
MIMAT0020228
APAU02000107.1
117509
117581
+
Bilateria
Bilateria
No
1
Eba-Mir-1
None
MIR-1
GGAAUGU
None
None
WURV02201605.1
7089
7147
-
Bilateria
Bilateria
No
Dya-Mir-1
dya-mir-1
MIR-1
GGAAUGU
None
MIMAT0009083
2R
6842741
6842801
+
Bilateria
Bilateria
No
1
Dsi-Mir-1
dsi-mir-1
MIR-1
GGAAUGU
None
MIMAT0008867
2L
19904997
19905056
+
Bilateria
Bilateria
No
1
Dpu-Mir-1
dpu-mir-1
MIR-1
GGAAUGU
None
MIMAT0012635
DAPPUscaffold_1
1720883
1720944
-
Bilateria
Bilateria
No
1
Dmo-Mir-1
dmo-mir-1
MIR-1
GGAAUGU
None
MIMAT0008694
scaffold_6500
24555202
24555262
+
Bilateria
Bilateria
No
1
Dme-Mir-1
dme-mir-1
MIR-1
GGAAUGU
MIMAT0020779
MIMAT0000105
2L
20487458
20487517
+
Bilateria
Bilateria
No
1
Dma-Mir-1
None
MIR-1
GGAAUGU
None
None
NC_046176.1
5279564
5279624
-
Bilateria
Bilateria
No
1
Dlo-Mir-1
None
MIR-1
GGAAUGU
None
None
NC_087227.1
7390631
7390688
+
Bilateria
Bilateria
No
1
1
Dgr-Mir-1
None
MIR-1
GGAAUGU
None
None
CAJFCJ010000002.1
2097127
2097179
+
Bilateria
Bilateria
Unknown
1
Dan-Mir-1
dan-mir-1
MIR-1
GGAAUGU
None
MIMAT0008432
scaffold_12916
6985839
6985899
+
Bilateria
Bilateria
No
1
Cte-Mir-1
cte-mir-1
MIR-1
GGAAUGU
None
MIMAT0009502
CAPTEscaffold_274
105952
106014
-
Bilateria
Bilateria
No
Cin-Mir-1
cin-mir-1
MIR-1
GGAAUGU
MIMAT0016392
MIMAT0016393
1
8400375
8400469
+
Bilateria
Bilateria
No
1
Cel-Mir-1
cel-mir-1
MIR-1
GGAAUGU
MIMAT0020301
MIMAT0000003
chrI
6172677
6172737
-
Bilateria
Bilateria
No
Cbr-Mir-1
cbr-mir-1
MIR-1
GGAAUGU
None
MIMAT0000465
I
9430184
9430244
-
Bilateria
Bilateria
No
Bla-Mir-1
None
MIR-1
GGAAUGU
None
None
Sc0000092
697292
697351
-
Bilateria
Bilateria
No
1
Bge-Mir-1
None
MIR-1
GGAAUGU
None
None
KZ614843.1
338349
338408
+
Bilateria
Bilateria
No
1
Bfl-Mir-1
bfl-mir-1
MIR-1
GGAAUGU
MIMAT0019137
MIMAT0009463
NC_049980.1
25940046
25940105
-
Bilateria
Bilateria
No
1
Asu-Mir-1
asu-mir-1
MIR-1
GGAAUGU
MIMAT0021423
MIMAT0021424
Scaffold592
89761
89822
+
Bilateria
Bilateria
No
1
1
Agr-Mir-1
None
MIR-1
GGAAUGU
None
None
JABBOT010000007.1
18327039
18327098
+
Bilateria
Bilateria
No
1
Aga-Mir-1
aga-mir-1
MIR-1
GGAAUGU
None
MIMAT0001496
NC_064602.1
10484100
10484162
-
Bilateria
Bilateria
No
Aae-Mir-1
aae-mir-1
MIR-1
GGAAUGU
None
MIMAT0014244
supercont1.812
291334
291394
+
Bilateria
Bilateria
No
1
Pma-Mir-1-o1
pma-mir-1a
MIR-1
GGAAUGU
MIMAT0019364
MIMAT0019365
NC_046083.1
5668447
5668507
-
P. marinus
Bilateria
No
1
Pma-Mir-1-o2
pma-mir-1b
MIR-1
GGAAUGU
None
MIMAT0019366
NC_046080.1
13837276
13837337
+
P. marinus
Bilateria
No
1
Pma-Mir-1-o3
None
MIR-1
GGAAUGU
None
None
NC_046091.1
2243020
2243080
+
P. marinus
Bilateria
No
Pma-Mir-1-o4
pma-mir-1c
MIR-1
GGAAUGU
MIMAT0019367
MIMAT0019368
NC_046111.1
10594887
10594948
+
P. marinus
Bilateria
No
1
Xtr-Mir-1-P1
xtr-mir-1a-1
MIR-1
GGAAUGU
None
MIMAT0003551
chr6
93553291
93553351
-
Gnathostomata
Bilateria
No
1
Tni-Mir-1-P1
tni-mir-1
MIR-1
GGAAUGU
None
MIMAT0003072
15_random
1423496
1423557
-
Gnathostomata
Bilateria
No
Tgu-Mir-1-P1
tgu-mir-1-2
MIR-1
GGAAUGU
MIMAT0027002
MIMAT0014562
2
104326417
104326477
-
Gnathostomata
Bilateria
No
1
Sto-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
BFAA01002411.1
267636
267696
+
Gnathostomata
Bilateria
No
1
Spt-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
QEPC01012606.1
114175
114235
-
Gnathostomata
Bilateria
Unknown
1
Sha-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
GL841304.1
688930
688990
+
Gnathostomata
Bilateria
No
Rno-Mir-1-P1
rno-mir-1
MIR-1
GGAAUGU
MIMAT0003162
MIMAT0003125
chr18
2054945
2055005
-
Gnathostomata
Bilateria
No
1
1
Pbv-Mir-1-P1
pbv-mir-1a-2
MIR-1
GGAAUGU
MIMAT0038814
MIMAT0038813
KE953557.1
24105
24165
+
Gnathostomata
Bilateria
No
1
Pab-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
CM054696.2
36018962
36019022
-
Gnathostomata
Bilateria
No
1
Ocu-Mir-1-P1
ocu-mir-1-2
MIR-1
GGAAUGU
MIMAT0048091
MIMAT0048092
chr9
63183544
63183604
-
Gnathostomata
Bilateria
No
Oan-Mir-1-P1
oan-mir-1a
MIR-1
GGAAUGU
MIMAT0026752
MIMAT0006863
NC_041734.1
21771963
21772023
+
Gnathostomata
Bilateria
No
Neu-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
CM051816.1
245602943
245603003
-
Gnathostomata
Bilateria
No
1
Mun-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
CABFKJ010010552.1
43218
43278
-
Gnathostomata
Bilateria
No
1
Mmu-Mir-1-P1
mmu-mir-1a-2
MIR-1
GGAAUGU
MIMAT0017047
MIMAT0000123
chr18
10785485
10785545
-
Gnathostomata
Bilateria
No
1
1
Mmr-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
CM007679.1
64877323
64877383
+
Gnathostomata
Bilateria
No
1
Mml-Mir-1-P1
mml-mir-1-2
MIR-1
GGAAUGU
MIMAT0031099
MIMAT0006150
CM014353.1
60575941
60576001
+
Gnathostomata
Bilateria
No
1
Mdo-Mir-1-P1
mdo-mir-1-1
MIR-1
GGAAUGU
MIMAT0026647
MIMAT0004085
3
263364387
263364447
+
Gnathostomata
Bilateria
No
1
Mal-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
KV884702.1
3975017
3975076
+
Gnathostomata
Bilateria
No
Loc-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
LG9
563078
563139
+
Gnathostomata
Bilateria
No
Lch-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
BAHO01228262.1
6305
6365
-
Gnathostomata
Bilateria
Unknown
1
Laf-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
GL010031.1
80395761
80395821
+
Gnathostomata
Bilateria
Unknown
1
Hsa-Mir-1-P1
hsa-mir-1-2
MIR-1
GGAAUGU
None
MIMAT0000416
chr18
21829015
21829075
-
Gnathostomata
Bilateria
No
1
Gmo-Mir-1-P1
gmo-mir-1-2
MIR-1
GGAAUGU
MIMAT0044247
MIMAT0044042
GeneScaffold_377
378532
378593
+
Gnathostomata
Bilateria
No
1
Gja-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
NW_015169808.1
43186
43246
-
Gnathostomata
Bilateria
No
1
Gga-Mir-1-P1
gga-mir-1a-2
MIR-1
GGAAUGU
MIMAT0026510
MIMAT0001127
2
102518401
102518461
-
Gnathostomata
Bilateria
No
1
Ete-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
JH980306
11746527
11746587
-
Gnathostomata
Bilateria
No
Eca-Mir-1-P1
eca-mir-1-1
MIR-1
GGAAUGU
None
MIMAT0012994
CM009155.1
42946246
42946306
+
Gnathostomata
Bilateria
No
1
Dre-Mir-1-P1
dre-mir-1-2
MIR-1
GGAAUGU
None
MIMAT0001768
chr2
4116326
4116387
-
Gnathostomata
Bilateria
No
1
Dno-Mir-1-P1
dno-mir-1-2
MIR-1
GGAAUGU
MIMAT0047490
MIMAT0047489
JH569334
345965
346025
-
Gnathostomata
Bilateria
No
1
Cpo-Mir-1-P1
cpo-mir-1a
MIR-1
GGAAUGU
MIMAT0046837
MIMAT0046838
scaffold_14
40571811
40571871
+
Gnathostomata
Bilateria
No
1
Cpi-Mir-1-P1
cpi-mir-1a-2
MIR-1
GGAAUGU
MIMAT0037614
MIMAT0037613
JH584898
622510
622570
+
Gnathostomata
Bilateria
No
1
Cmi-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
KI635943.1
1405336
1405395
-
Gnathostomata
Bilateria
No
1
Cli-Mir-1-P1
cli-mir-1a-2
MIR-1
GGAAUGU
MIMAT0038393
MIMAT0038392
scaffold23
298717
298777
-
Gnathostomata
Bilateria
No
1
Cja-Mir-1-P1
None
MIR-1
GGAAUGU
None
None
CM021927.1
59824655
59824715
-
Gnathostomata
Bilateria
Unknown
1
Cfa-Mir-1-P1
cfa-mir-1-2
MIR-1
GGAAUGU
None
MIMAT0006656
chr7
66214379
66214439
+
Gnathostomata
Bilateria
No
1
Bta-Mir-1-P1
bta-mir-1-2
MIR-1
GGAAUGU
None
MIMAT0009214
NC_037351.1
34453385
34453445
+
Gnathostomata
Bilateria
No
1
Ami-Mir-1-P1
ami-mir-1a-2
MIR-1
GGAAUGU
MIMAT0038020
MIMAT0038019
NW_017707644.1
130805
130865
-
Gnathostomata
Bilateria
No
1
Aca-Mir-1-P1
aca-mir-1a-1
MIR-1
GGAAUGU
MIMAT0021839
MIMAT0021840
4
38859458
38859518
+
Gnathostomata
Bilateria
No
1
Xla-Mir-1-P1a
xla-mir-1a
MIR-1
GGAAUGU
MIMAT0046516
MIMAT0046517
NC_030734.1
108509462
108509522
-
X. laevis
Bilateria
No
1
Xla-Mir-1-P1b
None
MIR-1
GGAAUGU
None
None
NC_030735.1
85999311
85999371
-
X. laevis
Bilateria
No
1
Xtr-Mir-1-P2
xtr-mir-206
MIR-1
GGAAUGU
None
MIMAT0003623
chrUn_NW_016683369v1
1079510
1079569
-
Gnathostomata
Bilateria
No
1
Tgu-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
3
4387733
4387792
-
Gnathostomata
Bilateria
No
Spt-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
QEPC01009246.1
3251540
3251599
+
Gnathostomata
Bilateria
Unknown
1
Sha-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
GL856895.1
922331
922390
+
Gnathostomata
Bilateria
No
1
1
Rno-Mir-1-P2
rno-mir-206
MIR-1
GGAAUGU
MIMAT0017154
MIMAT0000879
chr9
26791776
26791835
+
Gnathostomata
Bilateria
No
1
Pbv-Mir-1-P2
pbv-mir-206
MIR-1
GGAAUGU
None
MIMAT0039011
KE957741.1
75305
75364
+
Gnathostomata
Bilateria
No
1
Pab-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
CM054684.2
52602595
52602654
+
Gnathostomata
Bilateria
No
1
1
Ocu-Mir-1-P2
ocu-mir-206
MIR-1
GGAAUGU
MIMAT0048327
MIMAT0048328
chr12
41638561
41638620
+
Gnathostomata
Bilateria
No
1
1
Oan-Mir-1-P2
oan-mir-206
MIR-1
GGAAUGU
MIMAT0006994
MIMAT0006995
NC_041749.1
16298545
16298604
+
Gnathostomata
Bilateria
No
1
1
Mun-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
1-P2_LR594634.1:397670098-397670239
42
101
-
Gnathostomata
Bilateria
No
1
Mmu-Mir-1-P2
mmu-mir-206
MIR-1
GGAAUGU
MIMAT0017004
MIMAT0000239
chr1
20679017
20679076
+
Gnathostomata
Bilateria
No
1
Mmr-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
CM007666.1
61436000
61436059
-
Gnathostomata
Bilateria
No
1
1
Mml-Mir-1-P2
mml-mir-206
MIR-1
GGAAUGU
None
MIMAT0006237
CM014339.1
117391918
117391977
-
Gnathostomata
Bilateria
No
1
1
Mdo-Mir-1-P2
mdo-mir-206
MIR-1
GGAAUGU
None
MIMAT0004128
2
300499005
300499064
+
Gnathostomata
Bilateria
No
1
1
Loc-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
LG1
45090601
45090660
+
Gnathostomata
Bilateria
No
1
1
Lch-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
JH130227.1
100423
100482
-
Gnathostomata
Bilateria
Unknown
Laf-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
GL010027.1
111496835
111496894
-
Gnathostomata
Bilateria
No
1
1
Hsa-Mir-1-P2
hsa-mir-206
MIR-1
GGAAUGU
None
MIMAT0000462
chr6
52144363
52144422
+
Gnathostomata
Bilateria
No
1
1
Gga-Mir-1-P2
gga-mir-206
MIR-1
GGAAUGU
None
MIMAT0001139
3
107587608
107587667
-
Gnathostomata
Bilateria
No
Ete-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
JH980293
106306244
106306303
-
Gnathostomata
Bilateria
No
1
1
Eca-Mir-1-P2
eca-mir-206-2
MIR-1
GGAAUGU
None
MIMAT0013098
CM009167.1
50837313
50837372
+
Gnathostomata
Bilateria
No
1
1
Dno-Mir-1-P2
dno-mir-206
MIR-1
GGAAUGU
MIMAT0047748
MIMAT0047749
JH569061
719151
719210
+
Gnathostomata
Bilateria
No
1
1
Cpo-Mir-1-P2
cpo-mir-206
MIR-1
GGAAUGU
MIMAT0047103
MIMAT0047104
scaffold_12
49857882
49857941
+
Gnathostomata
Bilateria
No
1
1
Cpi-Mir-1-P2
cpi-mir-206
MIR-1
GGAAUGU
MIMAT0037833
MIMAT0037834
JH584857
808079
808138
-
Gnathostomata
Bilateria
No
Cli-Mir-1-P2
cli-mir-206
MIR-1
GGAAUGU
MIMAT0038588
MIMAT0038589
C16600502
233
292
+
Gnathostomata
Bilateria
No
Cja-Mir-1-P2
None
MIR-1
GGAAUGU
None
None
CM021918.1
56602506
56602565
+
Gnathostomata
Bilateria
No
1
1
Cfa-Mir-1-P2
cfa-mir-206
MIR-1
GGAAUGU
None
MIMAT0006606
chr12
19805523
19805582
+
Gnathostomata
Bilateria
No
1
1
Bta-Mir-1-P2
bta-mir-206
MIR-1
GGAAUGU
None
MIMAT0009260
NC_037350.1
24567218
24567277
+
Gnathostomata
Bilateria
No
1
1
Ami-Mir-1-P2
ami-mir-206
MIR-1
GGAAUGU
MIMAT0038231
MIMAT0038232
NW_017710918.1
2014199
2014258
+
Gnathostomata
Bilateria
No
Aca-Mir-1-P2
aca-mir-206
MIR-1
GGAAUGU
MIMAT0021857
MIMAT0021858
1
122853042
122853101
+
Gnathostomata
Bilateria
No
1
Tni-Mir-1-P2a
None
MIR-1
GGAAUGU
None
None
14
5699806
5699865
+
Clupeocephala
Bilateria
No
1
Mal-Mir-1-P2a
None
MIR-1
GGAAUGU
None
None
KV884876.1
483561
483620
+
Clupeocephala
Bilateria
No
1
1
Gmo-Mir-1-P2a
gmo-mir-206
MIR-1
GGAAUGU
MIMAT0044198
MIMAT0044199
GeneScaffold_2491
51191
51250
+
Clupeocephala
Bilateria
No
1
1
Dre-Mir-1-P2a
dre-mir-206-1
MIR-1
GGAAUGU
MIMAT0031988
MIMAT0001866
chr20
19544667
19544726
-
Clupeocephala
Bilateria
No
1
Dre-Mir-1-P2b
dre-mir-206-2
MIR-1
GGAAUGU
None
MIMAT0001866
chr17
5967262
5967321
-
Clupeocephala
Bilateria
No
1
1
Xla-Mir-1-P2c
xla-mir-206
MIR-1
GGAAUGU
MIMAT0046526
MIMAT0046527
NC_030732.1
150790433
150790492
+
X. laevis
Bilateria
No
1
Xla-Mir-1-P2d
None
MIR-1
GGAAUGU
None
None
NC_030733.1
130017669
130017728
+
X. laevis
Bilateria
No
1
Gja-Mir-1-P2e
None
MIR-1
GGAAUGU
None
None
NW_015174362.1
18135
18194
+
G. japonicus
Bilateria
No
1
Gja-Mir-1-P2f
None
MIR-1
GGAAUGU
None
None
NW_015198665.1
1004
1063
-
G. japonicus
Bilateria
No
1
Xtr-Mir-1-P3
xtr-mir-1a-2
MIR-1
GGAAUGU
None
MIMAT0003551
chrUn_NW_016683679v1
104671
104732
-
Gnathostomata
Bilateria
No
1
Tni-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
Un_random
96815883
96815943
+
Gnathostomata
Bilateria
No
Tgu-Mir-1-P3
tgu-mir-1-1
MIR-1
GGAAUGU
MIMAT0031087
MIMAT0014562
20
9774777
9774837
-
Gnathostomata
Bilateria
No
Sto-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
BFAA01001513.1
296389
296449
+
Gnathostomata
Bilateria
No
1
Spt-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
QEPC01009477.1
3895976
3896036
+
Gnathostomata
Bilateria
Unknown
Sha-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
GL834662.1
616687
616747
-
Gnathostomata
Bilateria
No
Rno-Mir-1-P3
rno-mir-1b
MIR-1
GGAAUGU
None
MIMAT0037263
chr3
175769728
175769788
+
Gnathostomata
Bilateria
No
Pbv-Mir-1-P3
pbv-mir-1a-1
MIR-1
GGAAUGU
MIMAT0038812
MIMAT0038813
KE957326.1
96527
96587
+
Gnathostomata
Bilateria
No
Pab-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
CM054700.2
66987979
66988039
+
Gnathostomata
Bilateria
No
1
Ocu-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
1985387934
431
491
+
Gnathostomata
Bilateria
No
Oan-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
NC_041735.1
17247073
17247133
+
Gnathostomata
Bilateria
No
Mun-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
1-P3_LR594639.1:201445484-201445624
41
101
-
Gnathostomata
Bilateria
No
1
Mmu-Mir-1-P3
mmu-mir-1a-1
MIR-1
GGAAUGU
MIMAT0016979
MIMAT0000123
chr2
180389057
180389117
+
Gnathostomata
Bilateria
No
Mmr-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
CM007678.1
55665200
55665260
+
Gnathostomata
Bilateria
No
1
Mml-Mir-1-P3
mml-mir-1-1
MIR-1
GGAAUGU
MIMAT0026788
MIMAT0006150
CM014345.1
97708614
97708674
+
Gnathostomata
Bilateria
No
1
Mdo-Mir-1-P3
mdo-mir-1-2
MIR-1
GGAAUGU
MIMAT0031035
MIMAT0004085
1
476676455
476676515
-
Gnathostomata
Bilateria
No
Mal-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
KV884875.1
203676
203736
-
Gnathostomata
Bilateria
No
Loc-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
LG18
12097949
12098009
+
Gnathostomata
Bilateria
No
1
Lch-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
JH126883.1
1364534
1364594
+
Gnathostomata
Bilateria
Unknown
1
1
Laf-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
GL010148.1
1592564
1592624
-
Gnathostomata
Bilateria
No
1
1
Hsa-Mir-1-P3
hsa-mir-1-1
MIR-1
GGAAUGU
MIMAT0031892
MIMAT0000416
chr20
62554312
62554372
+
Gnathostomata
Bilateria
No
1
Gmo-Mir-1-P3
gmo-mir-1-1
MIR-1
GGAAUGU
MIMAT0044041
MIMAT0044042
contig374994
157
217
-
Gnathostomata
Bilateria
No
Gja-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
NW_015164299.1
20446
20506
+
Gnathostomata
Bilateria
No
1
Gga-Mir-1-P3
gga-mir-1a-1
MIR-1
GGAAUGU
MIMAT0031071
MIMAT0001127
20
8124314
8124374
+
Gnathostomata
Bilateria
No
Ete-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
JH980408
1070437
1070497
-
Gnathostomata
Bilateria
No
1
Eca-Mir-1-P3
eca-mir-1-2
MIR-1
GGAAUGU
None
MIMAT0012994
CM009169.1
49406945
49407005
+
Gnathostomata
Bilateria
No
Dre-Mir-1-P3
dre-mir-1-1
MIR-1
GGAAUGU
None
MIMAT0001768
chr23
7210180
7210240
-
Gnathostomata
Bilateria
No
Dno-Mir-1-P3
dno-mir-1-1
MIR-1
GGAAUGU
MIMAT0047488
MIMAT0047489
JH567234
192117
192176
+
Gnathostomata
Bilateria
No
Cpo-Mir-1-P3
cpo-mir-1b
MIR-1
GGAAUGU
MIMAT0046835
MIMAT0046836
scaffold_119
1571474
1571534
-
Gnathostomata
Bilateria
No
Cpi-Mir-1-P3
cpi-mir-1a-1
MIR-1
GGAAUGU
MIMAT0037612
MIMAT0037613
JH584739
1322413
1322473
-
Gnathostomata
Bilateria
No
Cmi-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
KI635860.1
8514612
8514672
+
Gnathostomata
Bilateria
No
1
Cli-Mir-1-P3
cli-mir-1a-1
MIR-1
GGAAUGU
MIMAT0038391
MIMAT0038392
scaffold36
3131822
3131882
-
Gnathostomata
Bilateria
No
Cja-Mir-1-P3
None
MIR-1
GGAAUGU
None
None
CM021919.1
55834261
55834321
+
Gnathostomata
Bilateria
Unknown
1
Cfa-Mir-1-P3
cfa-mir-1-1
MIR-1
GGAAUGU
None
MIMAT0006656
chr24
46481077
46481137
+
Gnathostomata
Bilateria
No
1
Bta-Mir-1-P3
bta-mir-1-1
MIR-1
GGAAUGU
None
MIMAT0009214
NC_037340.1
54745914
54745974
-
Gnathostomata
Bilateria
No
Ami-Mir-1-P3
ami-mir-1a-1
MIR-1
GGAAUGU
MIMAT0038018
MIMAT0038019
NW_017708899.1
1710026
1710086
-
Gnathostomata
Bilateria
No
Aca-Mir-1-P3
aca-mir-1a-2
MIR-1
GGAAUGU
MIMAT0021841
MIMAT0021840
4
151823211
151823271
+
Gnathostomata
Bilateria
No
Xla-Mir-1-P3a
None
MIR-1
GGAAUGU
None
None
NC_030740.1
14437497
14437558
-
X. laevis
Bilateria
No
1
Xla-Mir-1-P3b
None
MIR-1
GGAAUGU
None
None
NC_030741.1
13060817
13060878
-
X. laevis
Bilateria
No
1
Xtr-Mir-1-P4
xtr-mir-1b
MIR-1
GGAAUGU
None
MIMAT0003648
chr2
56468864
56468924
-
Gnathostomata
Bilateria
No
Tgu-Mir-1-P4
None
MIR-1
GGAAUGU
None
None
23
1378978
1379040
+
Gnathostomata
Bilateria
No
1
Sto-Mir-1-P4
None
MIR-1
GGAAUGU
None
None
BFAA01009687.1
86600
86658
-
Gnathostomata
Bilateria
Yes
1
Spt-Mir-1-P4
None
MIR-1
GGAAUGU
None
None
QEPC01003729.1
1183905
1183967
+
Gnathostomata
Bilateria
Unknown
1
Pbv-Mir-1-P4
pbv-mir-1b
MIR-1
GGAAUGU
MIMAT0038815
MIMAT0038816
KE958846.1
2692
2754
+
Gnathostomata
Bilateria
No
Oan-Mir-1-P4
oan-mir-1b
MIR-1
GGAAUGU
None
MIMAT0007149
NC_041743.1
39748483
39748544
+
Gnathostomata
Bilateria
No
1
Mun-Mir-1-P4
None
MIR-1
GGAAUGU
None
None
1-P4_LR594642.1:203283987-203284249
101
163
+
Gnathostomata
Bilateria
No
1
Lch-Mir-1-P4
None
MIR-1
GGAAUGU
None
None
JH126588.1
1227790
1227852
-
Gnathostomata
Bilateria
Unknown
1
Gga-Mir-1-P4
gga-mir-1b
MIR-1
GGAAUGU
MIMAT0026536
MIMAT0001175
23
4489739
4489801
+
Gnathostomata
Bilateria
No
1
Cpi-Mir-1-P4
cpi-mir-1b
MIR-1
GGAAUGU
MIMAT0037615
MIMAT0037616
JH584691
3527598
3527660
+
Gnathostomata
Bilateria
No
Cmi-Mir-1-P4
None
MIR-1
GGAAUGU
None
None
KI635975.1
547780
547839
+
Gnathostomata
Bilateria
No
1
Cli-Mir-1-P4
cli-mir-1b
MIR-1
GGAAUGU
MIMAT0038394
MIMAT0038395
scaffold391
951021
951083
-
Gnathostomata
Bilateria
No
1
Ami-Mir-1-P4
ami-mir-1b
MIR-1
GGAAUGU
MIMAT0038021
MIMAT0038022
NW_017707671.1
2164097
2164159
-
Gnathostomata
Bilateria
No
Aca-Mir-1-P4
aca-mir-1b
MIR-1
GGAAUGU
MIMAT0021842
MIMAT0021843
GL343308.1
91131
91193
+
Gnathostomata
Bilateria
No
Xla-Mir-1-P4a
xla-mir-1b
MIR-1
GGAAUGU
None
MIMAT0011135
NC_030726.1
79594590
79594650
-
X. laevis
Bilateria
No
1
Xla-Mir-1-P4b
None
MIR-1
GGAAUGU
None
None
NC_030727.1
66535671
66535731
-
X. laevis
Bilateria
No
1
Gja-Mir-1-P4c
None
MIR-1
GGAAUGU
None
None
NW_015201371.1
681
743
-
G. japonicus
Bilateria
No
Gja-Mir-1-P4d
None
MIR-1
GGAAUGU
None
None
NW_015167551.1
363813
363875
-
G. japonicus
Bilateria
No
Ebu-Mir-1-P5
None
MIR-1
GGAAUGU
None
None
FYBX02010259.1
2022308
2022368
-
E. burgeri
Bilateria
No
1
Ebu-Mir-1-P6a
None
MIR-1
GGAAUGU
None
None
FYBX02009999.1
893816
893876
-
E. burgeri
Bilateria
No
Ebu-Mir-1-P6b
None
MIR-1
GGAAUGU
None
None
FYBX02009999.1
876348
876408
-
E. burgeri
Bilateria
No
Ebu-Mir-1-P7
None
MIR-1
GGAAUGU
None
None
FYBX02010313.1
2329849
2329912
-
E. burgeri
Bilateria
No
1
Ebu-Mir-1-P8
None
MIR-1
GGAAUGU
None
None
FYBX02009839.1
5508863
5508923
+
E. burgeri
Bilateria
No
1
Efe-Mir-1-P9
None
MIR-1
GGAAUGU
None
None
Efet.01.1616378
99
157
+
E. fetida
Bilateria
No
1
1
Efe-Mir-1-P10
None
MIR-1
GGAAUGU
None
None
Efet.01.369952
2969
3031
+
E. fetida
Bilateria
No
1
Efe-Mir-1-P11
None
MIR-1
GGAAUGU
None
None
Efet.01.296011
338
398
-
E. fetida
Bilateria
No
1
Efe-Mir-1-P12
None
MIR-1
GGAAUGU
None
None
Efet.01.624356
499
560
-
E. fetida
Bilateria
Yes
1
1
Lpo-Mir-1-P13
None
MIR-1
GGAAUGU
None
None
NW_013666362.1
150600
150660
-
L. polyphemus
Bilateria
No
1
Lpo-Mir-1-P14
None
MIR-1
GGAAUGU
None
None
NW_013666779.1
103930
103990
+
L. polyphemus
Bilateria
No
1
1
Lpo-Mir-1-P15
None
MIR-1
GGAAUGU
None
None
NW_013665643.1
814640
814699
-
L. polyphemus
Bilateria
No
1
Lpo-Mir-1-P16
None
MIR-1
GGAAUGU
None
None
NW_013670974.1
27794
27854
-
L. polyphemus
Bilateria
No
1
1
Lpo-Mir-1-P17
None
MIR-1
GGAAUGU
None
None
NW_013672612.1
33992
34051
-
L. polyphemus
Bilateria
No
1
Csc-Mir-1-P18a
None
MIR-1
GGAAUGU
None
None
NW_019386523.1
39142
39203
+
C. sculpturatus
Bilateria
Unknown
1
Csc-Mir-1-P18b
None
MIR-1
GGAAUGU
None
None
NW_019385988.1
4423
4484
+
C. sculpturatus
Bilateria
Unknown
1
Csc-Mir-1-P19
None
MIR-1
GGAAUGU
None
None
NW_019385263.1
290247
290306
-
C. sculpturatus
Bilateria
No
1
Npo-Mir-1-P20
None
MIR-1
GGAAUGU
None
None
JACATO010002176.1
801170
801230
-
N. pompilius
Bilateria
Unknown
1
Npo-Mir-1-P21
None
MIR-1
GGAAUGU
None
None
JACATO010002176.1
1910758
1910818
-
N. pompilius
Bilateria
Unknown
1
Bpl-Mir-1-P22
None
MIR-1
GGAAUGU
None
None
QEOQ01000226.1
1075395
1075454
-
Brachionus
Bilateria
No
1
Bko-Mir-1-P22
None
MIR-1
GGAAUGU
None
None
PJRA01000444.1
1523881
1523940
-
Brachionus
Bilateria
No
1
Bpl-Mir-1-P23
None
MIR-1
GGAAUGU
None
None
QEOQ01000508.1
2616878
2616960
+
Brachionus
Bilateria
No
1
Bko-Mir-1-P23a
None
MIR-1
GGAAUGU
None
None
PJRA01000509.1
691716
691778
-
B. koreanus
Bilateria
No
1
Bko-Mir-1-P23b
None
MIR-1
GGAAUGU
None
None
PJRA01000428.1
739380
739442
-
B. koreanus
Bilateria
No
1
Sme-Mir-1-P24
sme-mir-1a
MIR-1
GGAAUGU
MIMAT0012090
MIMAT0003960
NNSW01000005_dd_Smes_g4_5
4406441
4406506
+
S. mediterranea
Bilateria
No
1
1
Sme-Mir-1-P25
sme-mir-1b
MIR-1
GGAAUGU
MIMAT0012091
MIMAT0003961
NNSW01000241_dd_Smes_g4_241
658560
658620
-
S. mediterranea
Bilateria
No
1
Sme-Mir-1-P26
sme-mir-1c
MIR-1
GGAAUGU
MIMAT0012092
MIMAT0003962
NNSW01000241_dd_Smes_g4_241
653765
653818
-
S. mediterranea
Bilateria
Yes
1
Pve-Mir-1-P27
None
MIR-1
GGAAUGU
None
None
CM062291.1:267155002-267155261
101
160
+
Dentaliidae
Bilateria
No
1
1
Pve-Mir-1-P28
None
MIR-1
GGAAUGU
None
None
CM062290.1:454114149-454114408
101
160
+
Dentaliidae
Bilateria
No
1
Ava-Mir-1-P29
None
MIR-1
GGAAUGU
None
None
CP075494.1
11165953
11166012
+
A. vaga
Bilateria
No
1
Ava-Mir-1-P30
None
MIR-1
GGAAUGU
None
None
CP075495.1
7087251
7087310
-
A. vaga
Bilateria
No
1
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