MirGeneDB 3.0
216 Petromyzon marinus microRNA genes
Sort by genome coordinates Motifs Tissue expression
-   +
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Br Gi Gu He Ki La Li Mo Mu Sk
Pma-Let-7-P1o1 pma-let-7a-4 LET-7 GAGGUAG MIMAT0019564 None NC_046100.1 8235683 8235748 + P. marinus Bilateria Unknown 1
Pma-Let-7-P2o13 pma-let-7a-2 LET-7 GAGGUAG MIMAT0019564 None NC_046114.1 5799374 5799444 - P. marinus Bilateria Unknown 1
Pma-Let-7-P2o14 pma-let-7b LET-7 GAGGUAG MIMAT0019565 MIMAT0019566 NC_046114.1 5797939 5798018 - P. marinus Bilateria Unknown
Pma-Let-7-P2o15 None LET-7 GAGGUAG None None NC_046098.1 6021517 6021585 + P. marinus Bilateria Yes 1
Pma-Let-7-P2o16 pma-let-7a-1 LET-7 GAGGUAG MIMAT0019564 None NC_046098.1 6023610 6023690 + P. marinus Bilateria Unknown 1
Pma-Let-7-P2o17 pma-let-7a-3 LET-7 GAGGUAG MIMAT0019564 None NC_046082.1 2075146 2075217 + P. marinus Bilateria Yes 1
Pma-Let-7-P2o18 pma-let-7d LET-7 GAGGUAG MIMAT0019568 None NC_046082.1 2081955 2082034 + P. marinus Bilateria Yes 1
Pma-Let-7-P2o19 pma-let-7c LET-7 GAGGUAG MIMAT0019567 None NC_046116.1 8594940 8595011 + P. marinus Bilateria Unknown 1
Pma-Let-7-P2o20 None LET-7 GAGGUAG None None NC_046116.1 8596307 8596384 + P. marinus Bilateria Unknown 1
Pma-Mir-1-o1 pma-mir-1a MIR-1 GGAAUGU MIMAT0019364 MIMAT0019365 NC_046083.1 5668447 5668507 - P. marinus Bilateria No 1
Pma-Mir-1-o2 pma-mir-1b MIR-1 GGAAUGU None MIMAT0019366 NC_046080.1 13837276 13837337 + P. marinus Bilateria No 1
Pma-Mir-1-o3 None MIR-1 GGAAUGU None None NC_046091.1 2243020 2243080 + P. marinus Bilateria No
Pma-Mir-1-o4 pma-mir-1c MIR-1 GGAAUGU MIMAT0019367 MIMAT0019368 NC_046111.1 10594887 10594948 + P. marinus Bilateria No 1
Pma-Mir-7-o1 pma-mir-7a-1 MIR-7 GGAAGAC MIMAT0019370 None NC_046108.1 8938333 8938394 + P. marinus Bilateria No
Pma-Mir-7-o2 pma-mir-7a-2 MIR-7 GGAAGAC MIMAT0019370 MIMAT0019371 NC_046081.1 7296550 7296611 - P. marinus Bilateria Unknown 1
Pma-Mir-7-o3 pma-mir-7b MIR-7 GGAAGAC MIMAT0019372 None NC_046120.1 7388941 7389002 + P. marinus Bilateria No 1
Pma-Mir-7-o4 None MIR-7 GGAAGAC None None NC_046069.1 32625068 32625130 - P. marinus Bilateria No 1 1
Pma-Mir-8-P1o2 pma-mir-200b MIR-8 AAUACUG MIMAT0019509 MIMAT0019510 NC_046107.1 8650259 8650316 + P. marinus Nephrozoa No 1
Pma-Mir-8-P2o2 None MIR-8 AACACUG None None NC_046107.1 8662357 8662419 + P. marinus Nephrozoa No
Pma-Mir-8-P3o2 pma-mir-429 MIR-8 AAUACUG MIMAT0019546 MIMAT0019547 NC_046107.1 8664757 8664820 + P. marinus Nephrozoa No 1 1
Pma-Mir-9-o1 pma-mir-9a-1 MIR-9 CUUUGGU MIMAT0019373 None NC_046108.1 4385189 4385250 + P. marinus Bilateria Unknown 1
Pma-Mir-9-o2 pma-mir-9a-2 MIR-9 CUUUGGU MIMAT0019373 MIMAT0019374 NC_046069.1 28947955 28948015 + P. marinus Bilateria No 1
Pma-Mir-9-o3 None MIR-9 CUUUGGU None None NC_046081.1 4287212 4287271 - P. marinus Bilateria No
Pma-Mir-9-o4 None MIR-9 CUUUGGU None None NC_046120.1 4110016 4110075 + P. marinus Bilateria No
Pma-Mir-9-o5 None MIR-9 CUUUGGU None None NC_046125.1 5636174 5636237 + P. marinus Bilateria No 1 1
Pma-Mir-10-P1o1 pma-mir-10a MIR-10 ACCCUGU MIMAT0019378 None NC_046072.1 6296303 6296365 - P. marinus Eumetazoa No 1
Pma-Mir-10-P1o2 pma-mir-10b MIR-10 ACCCUGU MIMAT0019376 MIMAT0019377 NC_046070.1 1266553 1266615 + P. marinus Eumetazoa No 1
Pma-Mir-10-P2o1 pma-mir-100a MIR-10 ACCCGUA MIMAT0019437 MIMAT0019438 NC_046100.1 8228227 8228284 + P. marinus Eumetazoa No 1
Pma-Mir-10-P2o2 pma-mir-100b MIR-10 ACCCGUA MIMAT0019439 None NC_046130.1 3628195 3628257 + P. marinus Eumetazoa Unknown
Pma-Mir-10-P3o1 pma-mir-125 MIR-10 CCCUGAG MIMAT0019446 MIMAT0019447 NC_046100.1 8251849 8251907 + P. marinus Eumetazoa No
Pma-Mir-10-P3o2 None MIR-10 CCCUGAG None None NC_046130.1 3640038 3640096 + P. marinus Eumetazoa Unknown 1
Pma-Mir-15-P1o1 pma-mir-15a MIR-15 AGCAGCA MIMAT0019379 None NC_046123.1 1714265 1714327 - P. marinus Olfactores No
Pma-Mir-15-P1o2 pma-mir-15b MIR-15 AGCAGCA MIMAT0019380 None NW_022638143.1 26054 26110 + P. marinus Olfactores Unknown 1
Pma-Mir-15-P1o3 pma-mir-497 MIR-15 AGCAGCA MIMAT0019556 MIMAT0019557 NC_046115.1 2947659 2947716 + P. marinus Olfactores Unknown
Pma-Mir-15-P2o1 None MIR-15 AGCAGCA None None NC_046123.1 1713872 1713934 - P. marinus Olfactores Unknown 1 1
Pma-Mir-15-P2o4 pma-mir-16 MIR-15 AGCAGCA MIMAT0019381 MIMAT0019382 NC_046089.1 3364264 3364322 + P. marinus Olfactores No 1 1
Pma-Mir-17-P1g pma-mir-17a MIR-17 AAAGUGC MIMAT0019383 MIMAT0019384 NC_046115.1 748761 748823 + P. marinus Vertebrata No 1 1
Pma-Mir-17-P2g pma-mir-18b MIR-17 AAGGUGC MIMAT0019389 MIMAT0019390 NC_046115.1 749056 749119 + P. marinus Vertebrata No 1
Pma-Mir-17-P2h pma-mir-18a MIR-17 AAGGUGC MIMAT0019387 MIMAT0019388 NC_046132.1 1977198 1977260 + P. marinus Vertebrata No
Pma-Mir-17-P3g pma-mir-17b MIR-17 AAAGUGC MIMAT0019385 None NC_046115.1 749682 749742 + P. marinus Vertebrata Unknown 1 1
Pma-Mir-17-P3h-v1 pma-mir-17c MIR-17 AAAGUGC MIMAT0019386 None NC_046132.1 1979765 1979827 + P. marinus Vertebrata No 1
Pma-Mir-17-P3h-v2 pma-mir-17c MIR-17 AAGUGCA MIMAT0019386 None NC_046132.1 1979766 1979827 + P. marinus Vertebrata No
Pma-Mir-17-P4g pma-mir-20a MIR-17 AAAGUGC MIMAT0019395 MIMAT0019396 NC_046115.1 751997 752055 + P. marinus Vertebrata No 1 1
Pma-Mir-17-P4h pma-mir-20b MIR-17 AAAGUGC MIMAT0019397 None NC_046132.1 1982814 1982876 + P. marinus Vertebrata Unknown 1
Pma-Mir-19-P1g pma-mir-19c MIR-19 GUGCAAA None MIMAT0019394 NC_046115.1 750373 750438 + P. marinus Vertebrata No 1
Pma-Mir-19-P1h pma-mir-19a MIR-19 GUGCAAA None MIMAT0019391 NC_046132.1 1980048 1980109 + P. marinus Vertebrata No
Pma-Mir-19-P2g pma-mir-19b MIR-19 GUGCAAA MIMAT0019392 MIMAT0019393 NC_046115.1 752202 752261 + P. marinus Vertebrata No
Pma-Mir-19-P2h None MIR-19 GUGCAAA None None NC_046132.1 1985769 1985843 + P. marinus Vertebrata No 1
Pma-Mir-21 None MIR-21 AGCUUAU None None NC_046073.1 17425919 17425985 + Vertebrata Vertebrata No 1 1
Pma-Mir-22-P1o2 pma-mir-22b MIR-22 AGCUGCC MIMAT0019400 MIMAT0019401 NC_046106.1 10906046 10906112 - P. marinus Bilateria No 1
Pma-Mir-22-P1o3 pma-mir-22a MIR-22 AGCUGCC MIMAT0019398 MIMAT0019399 NC_046073.1 16942602 16942664 - P. marinus Bilateria No 1
Pma-Mir-23-o1 pma-mir-23a MIR-23 UCACAUU MIMAT0019402 MIMAT0019403 NC_046103.1 7155810 7155873 - P. marinus Vertebrata No 1 1
Pma-Mir-23-o2 pma-mir-23b MIR-23 UCACAUU None MIMAT0019404 NC_046069.1 795034 795099 - P. marinus Vertebrata No 1
Pma-Mir-24-o1 pma-mir-24 MIR-24 GGCUCAG None MIMAT0019405 NC_046103.1 7153250 7153310 - P. marinus Vertebrata Yes 1
Pma-Mir-26-o1 pma-mir-26a-1 MIR-26 UCAAGUA MIMAT0019408 MIMAT0019409 NC_046072.1 10549245 10549307 - P. marinus Vertebrata Unknown 1
Pma-Mir-26-o2 pma-mir-26a-2 MIR-26 UCAAGUA MIMAT0019408 MIMAT0019410 NC_046070.1 25665244 25665301 + P. marinus Vertebrata Unknown 1 1
Pma-Mir-26-o3 pma-mir-26b MIR-26 UCAAGUA MIMAT0019411 MIMAT0019412 NC_046102.1 6813097 6813157 + P. marinus Vertebrata No 1 1
Pma-Mir-26-o4 None MIR-26 UCAAGUA None None NC_046078.1 15629166 15629223 + P. marinus Vertebrata No 1 1 1
Pma-Mir-27-o1 pma-mir-27a MIR-27 UCACAGU None MIMAT0019413 NC_046103.1 7153880 7153942 - P. marinus Vertebrata No 1 1
Pma-Mir-27-o2 pma-mir-27b MIR-27 UCACAGU MIMAT0019414 MIMAT0019415 NC_046069.1 793379 793439 - P. marinus Vertebrata No
Pma-Mir-29-P1o1 pma-mir-29a MIR-29 AGCACCA MIMAT0019416 MIMAT0019417 NC_046098.1 8340107 8340168 - P. marinus Bilateria No 1
Pma-Mir-29-P1o2 pma-mir-29b MIR-29 AGCACCA None MIMAT0019418 NC_046082.1 14311950 14312009 - P. marinus Bilateria No 1 1
Pma-Mir-29-P2o1 pma-mir-29d MIR-29 AGCACCA MIMAT0019420 MIMAT0019421 NC_046098.1 8341169 8341232 - P. marinus Bilateria No 1
Pma-Mir-29-P2o2 pma-mir-29c MIR-29 AGCACCA None MIMAT0019419 NC_046082.1 14313120 14313180 - P. marinus Bilateria No 1
Pma-Mir-30-P1o2 pma-mir-30d MIR-30 GUAAACA MIMAT0019427 None NW_022638108.1 592658 592723 - P. marinus Vertebrata Unknown 1 1
Pma-Mir-30-P1o3a pma-mir-30e MIR-30 GUAAACA MIMAT0019428 MIMAT0019429 NC_046095.1 8723764 8723824 + P. marinus Vertebrata No 1 1
Pma-Mir-30-P1o3b pma-mir-30a MIR-30 GUAAACA MIMAT0019422 MIMAT0019423 NC_046095.1 8724552 8724613 + P. marinus Vertebrata No 1
Pma-Mir-30-P1o4 pma-mir-30c MIR-30 GUAAACA MIMAT0019425 MIMAT0019426 NC_046080.1 2710055 2710122 - P. marinus Vertebrata Unknown 1 1
Pma-Mir-30-P1o5 pma-mir-30b MIR-30 GUAAACA MIMAT0019424 None NC_046083.1 11307703 11307768 - P. marinus Vertebrata No 1
Pma-Mir-30-P2o3 pma-mir-30g MIR-30 GUAAACA MIMAT0019431 None NC_046095.1 8724827 8724889 + P. marinus Vertebrata Unknown 1 1
Pma-Mir-30-P2o4 pma-mir-30f-1 MIR-30 GUAAACA MIMAT0019430 None NC_046080.1 2700975 2701036 - P. marinus Vertebrata No 1 1 1
Pma-Mir-30-P2o5 pma-mir-30f-2 MIR-30 GUAAACA MIMAT0019430 None NC_046083.1 11295448 11295510 - P. marinus Vertebrata Unknown 1
Pma-Mir-33-o1 pma-mir-33a MIR-33 UGCAUUG MIMAT0019433 None NC_046094.1 312250 312305 - P. marinus Bilateria Unknown
Pma-Mir-33-o2 pma-mir-33b MIR-33 UGCAUUG MIMAT0019434 None NC_046140.1 1502770 1502832 + P. marinus Bilateria No
Pma-Mir-33-o3 None MIR-33 UGCAUUG None None NC_046111.1 1209366 1209429 - P. marinus Bilateria Unknown
Pma-Mir-34-P1 None MIR-34 GGCAGUG None None NC_046107.1 11782397 11782476 + Vertebrata Bilateria Unknown 1 1
Pma-Mir-34-P3 None MIR-34 GGCAGUG None None NC_046069.1 12486898 12486963 + Vertebrata Bilateria Unknown 1
Pma-Mir-92-P1g pma-mir-92a MIR-92 AUUGCAC None MIMAT0019435 NC_046115.1 752414 752471 + P. marinus Bilateria No
Pma-Mir-92-P1h None MIR-92 AUUGCAC None None NC_046132.1 1986098 1986160 + P. marinus Bilateria No
Pma-Mir-92-P1o1 None MIR-92 AUUGCAC None None NC_046125.1 4120584 4120644 - P. marinus Bilateria No 1 1
Pma-Mir-92-P2g pma-mir-25b MIR-92 AUUGCAC MIMAT0019406 MIMAT0019407 NC_046115.1 754312 754371 + P. marinus Bilateria No 1
Pma-Mir-96-P1o1 pma-mir-96a MIR-96 UUGGCAC MIMAT0019436 None NC_046104.1 2252300 2252362 - P. marinus Bilateria Unknown 1 1
Pma-Mir-96-P1o2 None MIR-96 UUGGCAC None None NC_046114.1 7245787 7245851 + P. marinus Bilateria Unknown 1
Pma-Mir-96-P2o1 pma-mir-182 MIR-96 UUGGCAA MIMAT0019490 None NC_046104.1 2252108 2252170 - P. marinus Bilateria Unknown
Pma-Mir-96-P3o1 pma-mir-183 MIR-96 AUGGCAC MIMAT0019491 MIMAT0019492 NC_046104.1 2254548 2254609 - P. marinus Bilateria Unknown 1 1
Pma-Mir-96-P3o2 None MIR-96 AUGGCAC None None NC_046114.1 7244256 7244315 + P. marinus Bilateria Unknown 1
Pma-Mir-103-o1 pma-mir-103a MIR-103 GCAGCAU None MIMAT0019441 NC_046077.1 13031137 13031200 + P. marinus Bilateria No 1 1
Pma-Mir-103-o2 pma-mir-103b MIR-103 GCAGCAU MIMAT0019442 MIMAT0019443 NC_046097.1 13332364 13332421 + P. marinus Bilateria No 1
Pma-Mir-122 None MIR-122 GGAGUGU None None NC_046069.1 32474024 32474085 + Vertebrata Vertebrata No 1
Pma-Mir-124-o1 pma-mir-124 MIR-124 AAGGCAC MIMAT0019444 MIMAT0019445 NC_046071.1 1967907 1967965 + P. marinus Bilateria No 1
Pma-Mir-124-o2 None MIR-124 AAGGCAC None None PIZI01000017.1 1565775 1565833 + P. marinus Bilateria No 1
Pma-Mir-124-o3 None MIR-124 AAGGCAC None None NC_046080.1 14825366 14825425 - P. marinus Bilateria No 1
Pma-Mir-126-o1 pma-mir-126 MIR-126 CGUACCG None MIMAT0019448 NC_046073.1 1914711 1914768 + P. marinus Olfactores No 1
Pma-Mir-128-o1 pma-mir-128-1 MIR-128 CACAGUG None MIMAT0019449 NC_046078.1 9991857 9991920 + P. marinus Vertebrata No 1
Pma-Mir-128-o2 pma-mir-128-2 MIR-128 CACAGUG None MIMAT0019449 NC_046070.1 11831279 11831342 - P. marinus Vertebrata No 1 1
Pma-Mir-128-o3 None MIR-128 CACAGUG None None NC_046124.1 3847691 3847753 + P. marinus Vertebrata No 1 1
Pma-Mir-129-o1 pma-mir-129a MIR-129 UUUUUGC MIMAT0019450 MIMAT0019451 NC_046075.1 14326346 14326407 - P. marinus Chordata No 1 1
Pma-Mir-129-o2 None MIR-129 UUUUUGC None None NW_022639030.1 84343 84414 - P. marinus Chordata Unknown 1 1
Pma-Mir-130-P1o1 pma-mir-130a MIR-130 AGUGCAA MIMAT0019454 MIMAT0019455 NC_046073.1 9804247 9804309 + P. marinus Vertebrata No 1
Pma-Mir-130-P1o2 pma-mir-130b MIR-130 AGUGCAA None MIMAT0019456 NC_046106.1 983243 983302 - P. marinus Vertebrata No 1 1
Pma-Mir-130-P1o3 pma-mir-130c MIR-130 AGUGCAA None MIMAT0019457 NW_022638183.1 735210 735270 + P. marinus Vertebrata No 1
Pma-Mir-130-P2o1 pma-mir-301b MIR-130 AGUGCAA None MIMAT0019537 NC_046073.1 9811592 9811655 + P. marinus Vertebrata No 1
Pma-Mir-130-P2o2 pma-mir-301a MIR-130 AGUGCAA None MIMAT0019536 NC_046106.1 983107 983167 - P. marinus Vertebrata No
Pma-Mir-130-P4o1 pma-mir-130d MIR-130 AGUGCAA None MIMAT0019452 NC_046073.1 9819109 9819168 + P. marinus Vertebrata No 1 1
Pma-Mir-130-P4o3 pma-mir-130e MIR-130 AGUGCAA None MIMAT0019453 NW_022638183.1 736525 736588 + P. marinus Vertebrata No 1
Pma-Mir-132-o1 None MIR-132 AACAGUC None None NW_022638381.1 3829 3892 + P. marinus Vertebrata No 1
Pma-Mir-132-o2 pma-mir-212 MIR-132 CAGUCUU MIMAT0019523 MIMAT0019524 NW_022638381.1 2463 2521 + P. marinus Vertebrata No 1
Pma-Mir-132-o3 pma-mir-132 MIR-132 AACAGUC MIMAT0019458 MIMAT0019459 PIZI01000127.1 315360 315423 - P. marinus Vertebrata No 1 1
Pma-Mir-133-o1-v1 None MIR-133 UUGGUCC None None NC_046083.1 5663026 5663083 - P. marinus Bilateria No 1
Pma-Mir-133-o1-v2 None MIR-133 UGGUCCC None None NC_046083.1 5663026 5663083 - P. marinus Bilateria No 1
Pma-Mir-133-o2-v1 None MIR-133 UUGGUCC None None NC_046080.1 13840305 13840363 + P. marinus Bilateria No 1
Pma-Mir-133-o2-v2 None MIR-133 UGGUCCC None None NC_046080.1 13840305 13840363 + P. marinus Bilateria No 1
Pma-Mir-133-o3-v1 pma-mir-133a MIR-133 UUGGUCC None MIMAT0019460 NC_046091.1 2255639 2255697 + P. marinus Bilateria Yes 1
Pma-Mir-133-o3-v2 pma-mir-133a MIR-133 UGGUCCC None MIMAT0019460 NC_046091.1 2255639 2255697 + P. marinus Bilateria Yes 1
Pma-Mir-133-o4-v1 None MIR-133 UUGGUCC None None NC_046111.1 10633037 10633095 + P. marinus Bilateria Yes 1
Pma-Mir-133-o4-v2 None MIR-133 UGGUCCC None None NC_046111.1 10633037 10633095 + P. marinus Bilateria Yes 1
Pma-Mir-135-o1 pma-mir-135a MIR-135 AUGGCUU MIMAT0019463 MIMAT0019464 NC_046082.1 3812001 3812061 + P. marinus Chordata No
Pma-Mir-135-o2 pma-mir-135b MIR-135 AUGGCUU MIMAT0019465 None NC_046098.1 7520135 7520200 - P. marinus Chordata Unknown 1
Pma-Mir-137-o1 pma-mir-137-1 MIR-137 UAUUGCU MIMAT0019466 MIMAT0019467 NC_046103.1 528023 528081 + P. marinus Bilateria No 1
Pma-Mir-137-o2 pma-mir-137-2 MIR-137 CGGGUAU MIMAT0019468 MIMAT0019467 NC_046112.1 8645713 8645771 + P. marinus Bilateria No 1 1
Pma-Mir-137-o3 None MIR-137 UAUUGCU None None NC_046069.1 14010206 14010263 - P. marinus Bilateria No 1
Pma-Mir-138-o1 pma-mir-138a MIR-138 GCUGGUG MIMAT0019469 None NC_046122.1 1115167 1115233 - P. marinus Vertebrata Unknown 1 1
Pma-Mir-138-o2 None MIR-138 GCUGGUG None None NC_046088.1 7504922 7504989 + P. marinus Vertebrata Yes 1
Pma-Mir-138-o3 pma-mir-138b MIR-138 GCUGGUG MIMAT0019470 None NC_046113.1 8496747 8496809 + P. marinus Vertebrata Unknown 1 1
Pma-Mir-140-o1 pma-mir-140 MIR-140 AGUGGUU MIMAT0019471 None NC_046131.1 1629117 1629178 - P. marinus Vertebrata No
Pma-Mir-140-o2 None MIR-140 AGUGGUU None None NC_046093.1 1829730 1829791 - P. marinus Vertebrata No 1 1
Pma-Mir-140-o3 None MIR-140 CCACAGG None None PIZI01000964.1 4177 4240 + P. marinus Vertebrata No 1
Pma-Mir-142-v1 None MIR-142 UAGUGUU None None NW_022638250.1 104350 104408 - Vertebrata Vertebrata No 1
Pma-Mir-142-v2 None MIR-142 GUAGUGU None None NW_022638250.1 104351 104407 - Vertebrata Vertebrata No 1
Pma-Mir-143 pma-mir-143 MIR-143 GAGAUGA MIMAT0019472 MIMAT0019473 NC_046089.1 6110951 6111006 + Vertebrata Vertebrata Yes
Pma-Mir-144 pma-mir-144 MIR-144 ACAGUAU MIMAT0019474 MIMAT0019475 NC_046106.1 1186823 1186882 - Vertebrata Vertebrata No
Pma-Mir-145 pma-mir-145 MIR-145 UCCAGUU MIMAT0019476 MIMAT0019477 NC_046089.1 6112208 6112266 + Vertebrata Vertebrata Unknown 1 1
Pma-Mir-146 pma-mir-146 MIR-146 GAGAACU MIMAT0019478 MIMAT0019479 NC_046079.1 15291613 15291673 - Vertebrata Vertebrata Unknown 1
Pma-Mir-147 pma-mir-147 MIR-147 UGUGCGG None MIMAT0019480 NC_046125.1 6551863 6551929 + Vertebrata Vertebrata No 1 1
Pma-Mir-148-o1 pma-mir-152a MIR-148 CAGUGCA None MIMAT0019481 NC_046087.1 12147458 12147519 + P. marinus Vertebrata No 1
Pma-Mir-148-o2 pma-mir-152b MIR-148 CAGUGCA None MIMAT0019482 NC_046070.1 1713926 1713984 + P. marinus Vertebrata No 1
Pma-Mir-153-o1 pma-mir-153-1 MIR-153 UGCAUAG MIMAT0019483 MIMAT0019484 NC_046072.1 547240 547301 - P. marinus Bilateria No 1
Pma-Mir-153-o2 pma-mir-153-2 MIR-153 UGCAUAG None MIMAT0019484 NC_046087.1 10331164 10331225 + P. marinus Bilateria No 1 1
Pma-Mir-153-o3 pma-mir-153-3 MIR-153 UGCAUAG None MIMAT0019484 NC_046102.1 491761 491824 - P. marinus Bilateria No 1 1 1
Pma-Mir-155 pma-mir-155 MIR-155 UAAUGCU MIMAT0019485 None NC_046100.1 1740988 1741050 - Vertebrata Vertebrata Unknown
Pma-Mir-181-P1o1 pma-mir-181a MIR-181 ACAUUCA MIMAT0019486 MIMAT0019487 NC_046090.1 2946536 2946600 - P. marinus Vertebrata No 1
Pma-Mir-181-P1o2 None MIR-181 ACAUUCA None None NC_046118.1 4215267 4215339 + P. marinus Vertebrata No 1
Pma-Mir-181-P2o1 pma-mir-181b-1 MIR-181 ACAUUCA MIMAT0019488 MIMAT0019489 NC_046090.1 2942239 2942311 - P. marinus Vertebrata No 1
Pma-Mir-181-P2o2 None MIR-181 ACAUUCA None None NC_046118.1 4216042 4216102 + P. marinus Vertebrata Unknown 1 1
Pma-Mir-184 pma-mir-184 MIR-184 GGACGGA None MIMAT0019493 NC_046069.1 29639170 29639232 - Nephrozoa Nephrozoa No 1
Pma-Mir-190-o1 pma-mir-190a MIR-190 GAUAUGU MIMAT0019494 None NC_046069.1 19690194 19690256 - P. marinus Bilateria No 1 1
Pma-Mir-190-o2 pma-mir-190b MIR-190 GAUAUGU MIMAT0019495 MIMAT0019496 NC_046081.1 12047776 12047834 + P. marinus Bilateria Unknown 1 1
Pma-Mir-190-o3 None MIR-190 GAUAUGU None None NC_046125.1 1050359 1050420 + P. marinus Bilateria Unknown 1
Pma-Mir-192-o1 None MIR-192 UGACCUA None None NC_046074.1 5108757 5108818 + Cyclostomata Vertebrata No 1
Pma-Mir-193-P1 pma-mir-193 MIR-193 ACUGGCC None MIMAT0019499 NC_046105.1 10755166 10755225 + Bilateria Bilateria No
Pma-Mir-193-P2 None MIR-193 AAUGCCC None None NC_046126.1 4954419 4954480 - Bilateria Bilateria Unknown 1
Pma-Mir-194-o1 None MIR-194 GUAACAG None None NC_046074.1 5107960 5108016 + Cyclostomata Vertebrata No 1
Pma-Mir-196-o1 pma-mir-196a MIR-196 AGGUAGU MIMAT0019502 MIMAT0019503 NC_046078.1 8134714 8134775 + P. marinus Olfactores No 1
Pma-Mir-196-o2 None MIR-196 AGGUAGU None None NC_046070.1 1095082 1095141 + P. marinus Olfactores Unknown 1
Pma-Mir-196-o3 None MIR-196 AGGUAGU None None NC_046124.1 733295 733353 - P. marinus Olfactores Unknown 1
Pma-Mir-199-o1 pma-mir-199a MIR-199 CCAGUGU MIMAT0019505 MIMAT0019506 NC_046090.1 4834920 4834980 + P. marinus Vertebrata No 1 1
Pma-Mir-199-o2-v1 pma-mir-199b MIR-199 CAGUAGU MIMAT0019507 MIMAT0019508 NC_046118.1 9684029 9684090 + P. marinus Vertebrata No
Pma-Mir-199-o2-v2 pma-mir-199b MIR-199 ACAGUAG MIMAT0019507 MIMAT0019508 NC_046118.1 9684029 9684090 + P. marinus Vertebrata No
Pma-Mir-199-o2-v3 pma-mir-199b MIR-199 AGUAGUC MIMAT0019507 MIMAT0019508 NC_046118.1 9684029 9684090 + P. marinus Vertebrata No
Pma-Mir-199-o3 None MIR-199 CCAGUGU None None NC_046127.1 1016358 1016419 + P. marinus Vertebrata Unknown 1
Pma-Mir-202-P5 None MIR-202 UCCUAUG None None NW_022638231.1 172480 172539 + P. marinus Vertebrata Unknown 1 1
Pma-Mir-202-P6 None MIR-202 UCCUAUG None None NW_022638231.1 172894 172953 + P. marinus Vertebrata Unknown 1 1
Pma-Mir-203-o1 pma-mir-203a MIR-203 UGAAAUG MIMAT0019511 MIMAT0019512 NC_046101.1 7616657 7616716 - P. marinus Vertebrata No 1 1
Pma-Mir-203-o2-v1 pma-mir-203b MIR-203 UGAAAUG MIMAT0019513 MIMAT0019514 NC_046085.1 5367436 5367495 - P. marinus Vertebrata No 1 1
Pma-Mir-203-o2-v2 pma-mir-203b MIR-203 GAAAUGU MIMAT0019513 MIMAT0019514 NC_046085.1 5367436 5367495 - P. marinus Vertebrata Yes 1 1
Pma-Mir-203-o3-v1 None MIR-203 UGAAAUG None None NC_046121.1 2196027 2196086 - P. marinus Vertebrata Yes
Pma-Mir-203-o3-v2 None MIR-203 GAAAUGU None None NC_046121.1 2196027 2196086 - P. marinus Vertebrata Yes
Pma-Mir-204 pma-mir-204 MIR-204 UCCCUUU MIMAT0019515 MIMAT0019516 NC_046125.1 4465635 4465692 + Vertebrata Vertebrata No 1 1
Pma-Mir-205-o1 pma-mir-205a MIR-205 CCUUCAU MIMAT0019517 MIMAT0019518 NC_046082.1 10653082 10653140 - P. marinus Vertebrata No 1
Pma-Mir-205-o2 pma-mir-205b MIR-205 CCUUCAU MIMAT0019519 None NC_046116.1 8977433 8977496 + P. marinus Vertebrata No 1
Pma-Mir-208-P3a1-v1 pma-mir-208 MIR-208 UAAGACG MIMAT0019520 MIMAT0019521 NC_046131.1 4412220 4412281 + P. marinus Vertebrata No
Pma-Mir-208-P3a1-v2 pma-mir-208 MIR-208 AAGACGA MIMAT0019520 MIMAT0019521 NC_046131.1 4412220 4412281 + P. marinus Vertebrata No
Pma-Mir-208-P3a2-v1 pma-mir-208 MIR-208 UAAGACG MIMAT0019520 MIMAT0019521 NC_046131.1 4412220 4412281 + P. marinus Vertebrata No
Pma-Mir-208-P3a2-v2 pma-mir-208 MIR-208 AAGACGA MIMAT0019520 MIMAT0019521 NC_046131.1 4412220 4412281 + P. marinus Vertebrata No
Pma-Mir-208-P3a3-v1 pma-mir-208 MIR-208 UAAGACG MIMAT0019520 MIMAT0019521 NC_046131.1 4412220 4412281 + P. marinus Vertebrata No
Pma-Mir-208-P3a3-v2 pma-mir-208 MIR-208 AAGACGA MIMAT0019520 MIMAT0019521 NC_046131.1 4412220 4412281 + P. marinus Vertebrata No
Pma-Mir-208-P3b None MIR-208 UGCUCCU None None NC_046093.1 2192594 2192652 + P. marinus Vertebrata No
Pma-Mir-210 pma-mir-210 MIR-210 UGUGCGU None MIMAT0019522 NC_046092.1 553250 553306 - Bilateria Bilateria No 1
Pma-Mir-216-P2a1 pma-mir-216b MIR-216 AAUCUCU MIMAT0019527 None NC_046074.1 1955059 1955119 - Cyclostomata Nephrozoa Unknown 1
Pma-Mir-216-P2a2 None MIR-216 AAUCUCU None None NC_046097.1 6164884 6164943 - Cyclostomata Nephrozoa Unknown 1
Pma-Mir-216-P2b1 pma-mir-216a MIR-216 AAUCUCA MIMAT0019525 MIMAT0019526 NC_046074.1 1952348 1952411 - Cyclostomata Nephrozoa Unknown
Pma-Mir-217-P1 pma-mir-217a MIR-217 ACUGCAU MIMAT0019528 None NC_046074.1 1950981 1951039 - Cyclostomata Chordata Unknown 1
Pma-Mir-217-P2-v1 None MIR-217 ACUGCAU None None NC_046097.1 6160240 6160298 - Cyclostomata Chordata Unknown
Pma-Mir-217-P2-v2 None MIR-217 UACUGCA None None NC_046097.1 6160239 6160299 - Cyclostomata Chordata Unknown
Pma-Mir-218-o1 pma-mir-218a-1 MIR-218 UGUGCUU MIMAT0019529 MIMAT0019530 NC_046098.1 3240022 3240078 + P. marinus Vertebrata Unknown 1
Pma-Mir-218-o2 pma-mir-218a-2 MIR-218 UGUGCUU MIMAT0019529 None NC_046077.1 12174144 12174213 - P. marinus Vertebrata Unknown 1
Pma-Mir-218-o3 pma-mir-218b MIR-218 UGUGCUU MIMAT0019531 None NC_046079.1 14082498 14082561 - P. marinus Vertebrata Unknown
Pma-Mir-219-o1 None MIR-219 GAUUGUC None None NW_022638164.1 322376 322438 - P. marinus Bilateria Unknown 1
Pma-Mir-219-o2 None MIR-219 GAUUGUC None None NC_046127.1 7380300 7380363 - P. marinus Bilateria Unknown 1
Pma-Mir-221-P1o1 pma-mir-222 MIR-221 GCUACAU MIMAT0019533 MIMAT0019534 NC_046138.1 4279200 4279261 - P. marinus Vertebrata No 1 1
Pma-Mir-221-P2o1 pma-mir-221 MIR-221 GCUACAU None MIMAT0019532 NC_046138.1 4278405 4278466 - P. marinus Vertebrata No 1
Pma-Mir-223 None MIR-223 CAGUUUG None None NC_046134.1 469696 469757 + Vertebrata Vertebrata No 1
Pma-Mir-281-P12 None MIR-281 GUCAUGG None None NC_046102.1 10078122 10078197 + P. marinus Nephrozoa No 1
Pma-Mir-281-P13 pma-mir-281a MIR-281 GUCAUGG None MIMAT0019535 NC_046072.1 10038706 10038767 + P. marinus Nephrozoa No
Pma-Mir-315 pma-mir-315 MIR-315 UUUGAUU MIMAT0019539 None NC_046082.1 2604184 2604244 + Nephrozoa Nephrozoa No 1
Pma-Mir-338-o3 None MIR-338 CCAGCAU None None NC_046071.1 19738758 19738816 + P. marinus Vertebrata No 1
Pma-Mir-338-P3 pma-mir-338b MIR-338 CCAGUGU None MIMAT0019540 NC_046071.1 19740631 19740695 + Cyclostomata Vertebrata No
Pma-Mir-375-P5 pma-mir-375a MIR-375 UUGUUCG MIMAT0019542 MIMAT0019543 NC_046070.1 16994050 16994113 + P. marinus Nephrozoa No 1
Pma-Mir-375-P6 pma-mir-375b MIR-375 UUGUUCG MIMAT0019544 MIMAT0019545 NC_046078.1 14800303 14800366 - P. marinus Nephrozoa No
Pma-Mir-430-o35 None MIR-430 AAGUGCU None None NC_046076.1 2418146 2418209 - P. marinus Vertebrata No 1
Pma-Mir-451 pma-mir-451 MIR-451 AACCGUU MIMAT0019553 NC_046106.1 1186079 1186120 - Vertebrata Vertebrata NA 1
Pma-Mir-455 None MIR-455 GCAGUCC None None NC_046127.1 1877745 1877804 + Vertebrata Vertebrata Yes 1
Pma-Mir-456 pma-mir-456 MIR-456 AGGCUGG None MIMAT0019554 NC_046074.1 3682109 3682169 - Vertebrata Vertebrata Yes 1 1
Pma-Mir-459 pma-mir-459 MIR-459 CAGUAAC MIMAT0019555 None NW_022639232.1 6921 6983 - Vertebrata Vertebrata Unknown
Pma-Mir-499 None MIR-499 UAAGACU None None NC_046097.1 5133379 5133437 + Vertebrata Vertebrata Unknown 1 1
Pma-Mir-551-o1 pma-mir-551 MIR-551 CGACCCA None MIMAT0019558 NC_046107.1 2594938 2594998 + P. marinus Vertebrata Yes 1 1
Pma-Mir-875 pma-mir-875 MIR-875 AUACCUC MIMAT0019559 None NC_046080.1 10566495 10566553 + Vertebrata Vertebrata Unknown 1
Pma-Mir-1329 pma-mir-1329 MIR-1329 ACAGUGA MIMAT0019560 None NC_046095.1 6741701 6741764 + Vertebrata Vertebrata Unknown 1
Pma-Mir-1788 pma-mir-1788a MIR-1788 GCUUGUU MIMAT0019561 MIMAT0019562 NC_046070.1 17174897 17174957 + Vertebrata Vertebrata Yes
Pma-Mir-4541 pma-mir-4541 MIR-4541 AUAUUUA None MIMAT0019569 NC_046136.1 4815002 4815062 + Vertebrata Vertebrata No 1
Pma-Mir-4542 pma-mir-4542 MIR-4542 CAAGUGC MIMAT0019570 MIMAT0019571 NC_046092.1 9705019 9705078 - Cyclostomata Cyclostomata Yes 1
Pma-Mir-4543 pma-mir-4543 MIR-4543 AUAGGUC MIMAT0019572 None NC_046098.1 11451420 11451481 - Cyclostomata Cyclostomata Yes 1 1
Pma-Mir-4544 pma-mir-4544 MIR-4544 ACCCUAU MIMAT0019573 MIMAT0019574 NC_046084.1 9159188 9159246 - Cyclostomata Cyclostomata Yes 1 1
Pma-Mir-4545-P1-v1 pma-mir-4545 MIR-4545 ACAGCAU MIMAT0019575 MIMAT0019576 NC_046071.1 13966325 13966381 + Cyclostomata Cyclostomata Yes 1
Pma-Mir-4545-P1-v2 pma-mir-4545 MIR-4545 CAGCAUC MIMAT0019575 MIMAT0019576 NC_046071.1 13966325 13966381 + Cyclostomata Cyclostomata Yes 1 1
Pma-Mir-4571 pma-mir-4571 MIR-4571 GUGUGUG MIMAT0019603 MIMAT0019604 NC_046084.1 7079058 7079119 - P. marinus P. marinus Yes

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix